RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 SLC39A5Q6ZMH5 540 aa5.97□□□□□ -1.45
LTN1-206ENST00000486427 IRF2BP2Q7Z5L9 587 aa5.97□□□□□ -1.45
LTN1-206ENST00000486427 EXD3Q8N9H8 876 aa5.97□□□□□ -1.45
LTN1-206ENST00000486427 ZFPM2Q8WW38 1151 aa5.97□□□□□ -1.45
LTN1-206ENST00000486427 HMCESQ96FZ2 354 aa5.97□□□□□ -1.45
LTN1-206ENST00000486427 REXO5Q96IC2 774 aaKnown RBP5.97□□□□□ -1.45
LTN1-206ENST00000486427 ZFYVE19Q96K21 471 aa5.97□□□□□ -1.45
LTN1-206ENST00000486427 ZNF347Q96SE7 839 aa5.97□□□□□ -1.45
LTN1-206ENST00000486427 ABHD14AQ9BUJ0 271 aa5.97□□□□□ -1.45
LTN1-206ENST00000486427 CCDC134Q9H6E4 229 aa5.97□□□□□ -1.45
LTN1-206ENST00000486427 WDR26Q9H7D7 661 aa5.97□□□□□ -1.45
LTN1-206ENST00000486427 TRPC5Q9UL62 973 aaPredicted RBP5.97□□□□□ -1.45
LTN1-206ENST00000486427 SLC12A4Q9UP95 1085 aa5.97□□□□□ -1.45
LTN1-206ENST00000486427 DAAM1Q9Y4D1 1078 aa5.97□□□□□ -1.45
LTN1-206ENST00000486427 UGDHO60701 494 aa5.96□□□□□ -1.46
LTN1-206ENST00000486427 USP12O75317 370 aa5.96□□□□□ -1.46
LTN1-206ENST00000486427 CNTN5O94779 1100 aa5.96□□□□□ -1.46
LTN1-206ENST00000486427 PLCD1P51178 756 aa5.96□□□□□ -1.46
LTN1-206ENST00000486427 PUM3Q15397 648 aaKnown RBP5.96□□□□□ -1.46
LTN1-206ENST00000486427 ZACNQ401N2 412 aa5.96□□□□□ -1.46
LTN1-206ENST00000486427 EPHA10Q5JZY3 1008 aa5.96□□□□□ -1.46
LTN1-206ENST00000486427 PGBD2Q6P3X8 592 aa5.96□□□□□ -1.46
LTN1-206ENST00000486427 ADGRF4Q8IZF3 695 aa5.96□□□□□ -1.46
LTN1-206ENST00000486427 ADGRF3Q8IZF5 1079 aa5.96□□□□□ -1.46
LTN1-206ENST00000486427 SPICE1Q8N0Z3 855 aa5.96□□□□□ -1.46
LTN1-206ENST00000486427 SRFBP1Q8NEF9 429 aaKnown RBP5.96□□□□□ -1.46
LTN1-206ENST00000486427 ZBTB9Q96C00 473 aa5.96□□□□□ -1.46
LTN1-206ENST00000486427 PIMREGQ9BSJ6 248 aa5.96□□□□□ -1.46
LTN1-206ENST00000486427 FOXP1Q9H334 677 aaPredicted RBP5.96□□□□□ -1.46
LTN1-206ENST00000486427 CNTN6Q9UQ52 1028 aa5.96□□□□□ -1.46
LTN1-206ENST00000486427 SLC38A8A6NNN8 435 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 SGPL1O95470 568 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 BMP15O95972 392 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 IGFBP2P18065 325 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 B4GALNT1Q00973 533 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 TLE3Q04726 772 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 SF3A3Q12874 501 aaKnown RBP eCLIP5.95□□□□□ -1.46
LTN1-206ENST00000486427 LAMB3Q13751 1172 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 TRIM60Q495X7 471 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 MIDNQ504T8 468 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 LIPMQ5VYY2 423 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 AWAT2Q6E213 333 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 LIN54Q6MZP7 749 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 C1orf228Q6PIY5 440 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 ZNF366Q8N895 744 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 ATG16L2Q8NAA4 619 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 KAT2BQ92831 832 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 EID2BQ96D98 161 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 TRMOQ9BU70 441 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 KATNAL1Q9BW62 490 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 PLCB1Q9NQ66 1216 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 PAPOLBQ9NRJ5 636 aaKnown RBP5.95□□□□□ -1.46
LTN1-206ENST00000486427 TAGLN3Q9UI15 199 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 LZTS1Q9Y250 596 aa5.95□□□□□ -1.46
LTN1-206ENST00000486427 TRBV5-3A0A0A0MS03 114 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 A0A0G2JK05 382 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 F8W810 466 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 SYT5O00445 386 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 TRIM38O00635 465 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 SKAP2O75563 359 aaPredicted RBP5.94□□□□□ -1.46
LTN1-206ENST00000486427 ALDOAP04075 364 aaKnown RBP5.94□□□□□ -1.46
LTN1-206ENST00000486427 CYP3A4P08684 503 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 TMEM191BP0C7N4 346 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 GRK5P34947 590 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 PNLIPRP1P54315 467 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 BRD3Q15059 726 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 TECPR1Q7Z6L1 1165 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 ARFGAP1Q8N6T3 406 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 VPS37AQ8NEZ2 397 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 OR52N4Q8NGI2 321 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 CLEC4CQ8WTT0 213 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 MSI2Q96DH6 328 aaKnown RBP5.94□□□□□ -1.46
LTN1-206ENST00000486427 VCPIP1Q96JH7 1222 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 MPHOSPH6Q99547 160 aaKnown RBP5.94□□□□□ -1.46
LTN1-206ENST00000486427 ERVK-5Q9HDB9 667 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 ZBTB40Q9NUA8 1239 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.94□□□□□ -1.46
LTN1-206ENST00000486427 MSRB1Q9NZV6 116 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 NFU1Q9UMS0 254 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 HS3ST3B1Q9Y662 390 aa5.94□□□□□ -1.46
LTN1-206ENST00000486427 A0A1W2PPC1 479 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 ZNF814B7Z6K7 855 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 ACKR2O00590 384 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 TLX3O43711 291 aaPredicted RBP5.93□□□□□ -1.46
LTN1-206ENST00000486427 WNT1P04628 370 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 FGF2P09038 288 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 ALDOCP09972 364 aaKnown RBP5.93□□□□□ -1.46
LTN1-206ENST00000486427 TNFRSF1BP20333 461 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 TGM2P21980 687 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 SERPINF1P36955 418 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 ME1P48163 572 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 RBM6P78332 1123 aaKnown RBP5.93□□□□□ -1.46
LTN1-206ENST00000486427 ZNF260Q3ZCT1 412 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 KIAA1755Q5JYT7 1200 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 SCAMP5Q8TAC9 235 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 POF1BQ8WVV4 589 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 HMGB4Q8WW32 186 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 RSC1A1Q92681 617 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 RTKNQ9BST9 563 aa5.93□□□□□ -1.46
LTN1-206ENST00000486427 TUBB6Q9BUF5 446 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms