RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 BTBD8Q5XKL5 378 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 NUGGCQ68CJ6 796 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 ITPRIPL1Q6GPH6 555 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 LRRC8BQ6P9F7 803 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 FOXR1Q6PIV2 292 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 C6orf89Q6UWU4 347 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 SRLQ86TD4 932 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 NPAS4Q8IUM7 802 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 NUP93Q8N1F7 819 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 DBF4BQ8NFT6 615 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 GSDMBQ8TAX9 411 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 SPPL2BQ8TCT7 592 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 FATE1Q969F0 183 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 SPATA17Q96L03 361 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 CASD1Q96PB1 797 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 TMEM209Q96SK2 561 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 EBNA1BP2Q99848 306 aaKnown RBP12.31□□□□□ -0.44
PKP4-213ENST00000486254 RHOBTB2Q9BYZ6 727 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 TKTL2Q9H0I9 626 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 ANLNQ9NQW6 1124 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 MKS1Q9NXB0 559 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 DONSONQ9NYP3 566 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 ZC3H7BQ9UGR2 993 aaKnown RBP12.31□□□□□ -0.44
PKP4-213ENST00000486254 NEU3Q9UQ49 428 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 TTLL3Q9Y4R7 772 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 MYO18AQ92614 2054 aaKnown RBP12.31□□□□□ -0.44
PKP4-213ENST00000486254 MICAL3Q7RTP6 2002 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 FNDC1Q4ZHG4 1894 aaPredicted RBP12.31□□□□□ -0.44
PKP4-213ENST00000486254 CARNS1A5YM72 827 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 WASH4PA8MWX3 477 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 POC1B-GALNT4F8VUJ3 575 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 FAM72CH0Y354 149 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 H7C4K7 107 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 TBC1D4O60343 1298 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 TADA2AO75478 443 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 BANF1O75531 89 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 ALDH1A2O94788 518 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 LRIG2O94898 1065 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 RTN3O95197 1032 aaPredicted RBP12.3□□□□□ -0.44
PKP4-213ENST00000486254 CPP00450 1065 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 APOEP02649 317 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 KRT15P19012 456 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 CNTFP26441 200 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 GRIK1P39086 918 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 GARSP41250 739 aaKnown RBP12.3□□□□□ -0.44
PKP4-213ENST00000486254 OR1G1P47890 313 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 IL9RQ01113 521 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 SKIDA1Q1XH10 827 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 SLC39A12Q504Y0 691 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 FAM72AQ5TYM5 149 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 FAM72DQ6L9T8 149 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 PIGWQ7Z7B1 504 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 CPLX4Q7Z7G2 160 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 SCD5Q86SK9 330 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 SLC26A11Q86WA9 606 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 LRRC6Q86X45 466 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 FAM72BQ86X60 149 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 IGDCC3Q8IVU1 814 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 CACNA2D3Q8IZS8 1091 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 AGGF1Q8N302 714 aaeCLIP12.3□□□□□ -0.44
PKP4-213ENST00000486254 ZNF276Q8N554 614 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 MTBPQ96DY7 904 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 C1orf74Q96LT6 269 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 TOX2Q96NM4 488 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 LGMNQ99538 433 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 PRMT1Q99873 361 aaKnown RBP12.3□□□□□ -0.44
PKP4-213ENST00000486254 PLCD4Q9BRC7 762 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 MAGEB5Q9BZ81 275 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 OLA1Q9NTK5 396 aaKnown RBP12.3□□□□□ -0.44
PKP4-213ENST00000486254 TBK1Q9UHD2 729 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 IKBKGQ9Y6K9 419 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 GREB1Q4ZG55 1949 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 FAM159BA6NKW6 160 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 KCNU1A8MYU2 1149 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 CACNG3O60359 315 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 ASMTLO95671 621 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 INHBAP08476 426 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 SERPINB9P50453 376 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 DNAJC3Q13217 504 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 GPR17Q13304 367 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 MPP2Q14168 576 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 SPARCL1Q14515 664 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 PKN2Q16513 984 aaKnown RBP12.3□□□□□ -0.44
PKP4-213ENST00000486254 LGSNQ5TDP6 509 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 ZNF567Q8N184 647 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 LRRC43Q8N309 656 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 ANKS4BQ8N8V4 417 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 COLGALT1Q8NBJ5 622 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 DYDC1Q8WWB3 177 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 EDEM1Q92611 657 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 TTC17Q96AE7 1141 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 GRAMD1AQ96CP6 724 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 GBA3Q9H227 469 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 CATSPERBQ9H7T0 1116 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 MARCH5Q9NX47 278 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 DNAJB4Q9UDY4 337 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 TLR6Q9Y2C9 796 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 RRP15Q9Y3B9 282 aaKnown RBP12.3□□□□□ -0.44
PKP4-213ENST00000486254 MFHAS1Q9Y4C4 1052 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 PCDHA11Q9Y5I1 949 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms