RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 SH3GL3Q99963 347 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 P2RY13Q9BPV8 354 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 CENPHQ9H3R5 247 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 FBRSL1Q9HCM7 1045 aaKnown RBP11.18□□□□□ -0.62
DDX56-212ENST00000485367 FAM207AQ9NSI2 230 aaPredicted RBP11.18□□□□□ -0.62
DDX56-212ENST00000485367 C2orf42Q9NWW7 574 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 COMMD8Q9NX08 183 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 SMARCAL1Q9NZC9 954 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 GMIPQ9P107 970 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 CFAP97Q9P2B7 532 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 TPX2Q9ULW0 747 aaKnown RBP11.18□□□□□ -0.62
DDX56-212ENST00000485367 CFAP54Q96N23 3096 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 CFAP73A6NFT4 308 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 LILRB5O75023 590 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 RTN2O75298 545 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 CILPO75339 1184 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 NFATC1O95644 943 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 OLFM2O95897 454 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 EGFP01133 1207 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 GFPT1Q06210 699 aaPredicted RBP11.18□□□□□ -0.62
DDX56-212ENST00000485367 ITIH4Q14624 930 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 ZNF394Q53GI3 561 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 HEATR6Q6AI08 1181 aaKnown RBP11.18□□□□□ -0.62
DDX56-212ENST00000485367 CROCCP2Q86T23 111 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 ZC3H3Q8IXZ2 948 aaKnown RBP11.18□□□□□ -0.62
DDX56-212ENST00000485367 ANKS4BQ8N8V4 417 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 SUMF1Q8NBK3 374 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 CCT6BQ92526 530 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 RSRC1Q96IZ7 334 aaKnown RBP11.18□□□□□ -0.62
DDX56-212ENST00000485367 NACA2Q9H009 215 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 CSNK1G1Q9HCP0 422 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 RAB20Q9NX57 234 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 ETAA1Q9NY74 926 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 IL37Q9NZH6 218 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 ARMCX3Q9UH62 379 aaPredicted RBP11.18□□□□□ -0.62
DDX56-212ENST00000485367 MYOFQ9NZM1 2061 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 MYO16Q9Y6X6 1858 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 ESYT3A0FGR9 886 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 CHURC1-FNTBB4DL54 471 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 EPHB6O15197 1021 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 COCHO43405 550 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 GNA14O95837 355 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 DRD1P21728 446 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 ECHS1P30084 290 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 HPDP32754 393 aaPredicted RBP11.17□□□□□ -0.62
DDX56-212ENST00000485367 FNTBP49356 437 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 DMWDQ09019 674 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 HLTFQ14527 1009 aaKnown RBP eCLIP11.17□□□□□ -0.62
DDX56-212ENST00000485367 RPS6KA1Q15418 735 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 TDRD12Q587J7 1177 aaKnown RBP11.17□□□□□ -0.62
DDX56-212ENST00000485367 ZC3H12AQ5D1E8 599 aaKnown RBP11.17□□□□□ -0.62
DDX56-212ENST00000485367 DCLK2Q8N568 766 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 SEC14L1Q92503 715 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 CD101Q93033 1021 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 HEXIM2Q96MH2 286 aaKnown RBP11.17□□□□□ -0.62
DDX56-212ENST00000485367 FBXO44Q9H4M3 255 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 CCSER2Q9H7U1 834 aa11.17□□□□□ -0.62
DDX56-212ENST00000485367 K7ESF4 209 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 SLC9A3R1O14745 358 aaPredicted RBP11.16□□□□□ -0.62
DDX56-212ENST00000485367 BUB1O43683 1085 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 PGFP49763 221 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 MRPS25P82663 173 aaKnown RBP11.16□□□□□ -0.62
DDX56-212ENST00000485367 LMNB2Q03252 620 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 PPP2R5EQ16537 467 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 CBWD6Q4V339 395 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 ODF2Q5BJF6 829 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 CBWD3Q5JTY5 395 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 CBWD5Q5RIA9 395 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 SNX30Q5VWJ9 437 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 AP1ARQ63HQ0 302 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 PKN3Q6P5Z2 889 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 CLEC20AQ6ZU45 233 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 GPRIN1Q7Z2K8 1008 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 HOOK3Q86VS8 718 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 DDX42Q86XP3 938 aaKnown RBP eCLIP11.16□□□□□ -0.62
DDX56-212ENST00000485367 TTC39CQ8N584 583 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 CCDC26Q8TAB7 109 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 RAPGEF5Q92565 580 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 CHMP6Q96FZ7 201 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 FAM114A2Q9NRY5 505 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 CISHQ9NSE2 258 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 HAUS2Q9NVX0 235 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 AIPL1Q9NZN9 384 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 NCDNQ9UBB6 729 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 SMG5Q9UPR3 1016 aaKnown RBP11.16□□□□□ -0.62
DDX56-212ENST00000485367 FRYLO94915 3013 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 FAM92AA1XBS5 289 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 ZSCAN5CA6NGD5 496 aaPredicted RBP11.16□□□□□ -0.62
DDX56-212ENST00000485367 PGRMC1O00264 195 aaKnown RBP11.16□□□□□ -0.62
DDX56-212ENST00000485367 CYP26A1O43174 497 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 ATG13O75143 517 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 PAPSS2O95340 614 aaPredicted RBP11.16□□□□□ -0.62
DDX56-212ENST00000485367 CYP17A1P05093 508 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 ZDHHC11BP0C7U3 371 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 IRF1P10914 325 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 ACO1P21399 889 aaKnown RBP11.16□□□□□ -0.62
DDX56-212ENST00000485367 DRD4P21917 467 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 HOXC13P31276 330 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 TUBP50607 506 aa11.16□□□□□ -0.62
DDX56-212ENST00000485367 CLNS1AP54105 237 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms