RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CIR1Q86X95 450 aaPredicted RBP12.73□□□□□ -0.37
MSH5-216ENST00000484309 XYLT1Q86Y38 959 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 MFN1Q8IWA4 741 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 AZIN2Q96A70 460 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 RMDN1Q96DB5 314 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 C18orf8Q96DM3 657 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 ZC3H10Q96K80 434 aaKnown RBP12.73□□□□□ -0.37
MSH5-216ENST00000484309 DDX50Q9BQ39 737 aaKnown RBP12.73□□□□□ -0.37
MSH5-216ENST00000484309 ADAM33Q9BZ11 813 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 CD248Q9HCU0 757 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 MBD1Q9UIS9 605 aaPredicted RBP12.73□□□□□ -0.37
MSH5-216ENST00000484309 CYP8B1Q9UNU6 501 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 DMXL1Q9Y485 3027 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 M0QYT0 321 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 MAP3K13O43283 966 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 RHOBTB1O94844 696 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 EPHX1P07099 455 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 MPLP40238 635 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 ID4P47928 161 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 ZNF165P49910 485 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 CDR2Q01850 454 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 LMAN2Q12907 356 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 STARD3Q14849 445 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 EIF4HQ15056 248 aaKnown RBP12.72□□□□□ -0.37
MSH5-216ENST00000484309 RSPO4Q2I0M5 234 aaPredicted RBP12.72□□□□□ -0.37
MSH5-216ENST00000484309 KLHL40Q2TBA0 621 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 MAP7D1Q3KQU3 841 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 FUT11Q495W5 492 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 FNDC3BQ53EP0 1204 aaKnown RBP12.72□□□□□ -0.37
MSH5-216ENST00000484309 PMS2CLQ68D20 193 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 MBLAC2Q68D91 279 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 SMYD5Q6GMV2 418 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 SERPINA13PQ6UXR4 307 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 PRR23CQ6ZRP0 262 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 MMS22LQ6ZRQ5 1243 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 ADIPOR2Q86V24 386 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 TMEFF1Q8IYR6 380 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 DEFB119Q8N690 84 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 ATP6V0D2Q8N8Y2 350 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 WFIKKN2Q8TEU8 576 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 BTN2A3PQ96KV6 586 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 SPACA7Q96KW9 195 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 ERGIC2Q96RQ1 377 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 BPIFA3Q9BQP9 254 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 C11orf70Q9BRQ4 267 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 FUCA2Q9BTY2 467 aa12.72□□□□□ -0.37
MSH5-216ENST00000484309 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.72□□□□□ -0.37
MSH5-216ENST00000484309 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.72□□□□□ -0.37
MSH5-216ENST00000484309 ATXN2Q99700 1313 aaKnown RBP12.71□□□□□ -0.37
MSH5-216ENST00000484309 TP53BP1Q12888 1972 aaPredicted RBP12.71□□□□□ -0.37
MSH5-216ENST00000484309 LRRC10BA6NIK2 292 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 SMTNL1A8MU46 457 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 KCNU1A8MYU2 1149 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 F5H5T6 163 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 ZBTB24O43167 697 aaPredicted RBP12.71□□□□□ -0.37
MSH5-216ENST00000484309 GDF9O60383 454 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 LUC7L3O95232 432 aaKnown RBP12.71□□□□□ -0.37
MSH5-216ENST00000484309 GJB6O95452 261 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 LSM8O95777 96 aaKnown RBP12.71□□□□□ -0.37
MSH5-216ENST00000484309 ABCB4P21439 1286 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 CCR1P32246 355 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 NOS2P35228 1153 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 FLT3P36888 993 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 MATKP42679 507 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 GABRB2P47870 512 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 CENPCQ03188 943 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 EIF4EBP2Q13542 120 aaPredicted RBP12.71□□□□□ -0.37
MSH5-216ENST00000484309 CDH18Q13634 790 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 CSRP2Q16527 193 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 FSCBQ5H9T9 825 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 RNF43Q68DV7 783 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 TCEAL6Q6IPX3 200 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 TRNP1Q6NT89 227 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 ZNF677Q86XU0 584 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 ZDHHC17Q8IUH5 632 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 AHI1Q8N157 1196 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 GPR161Q8N6U8 529 aaKnown RBP12.71□□□□□ -0.37
MSH5-216ENST00000484309 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.71□□□□□ -0.37
MSH5-216ENST00000484309 ZNF397Q8NF99 534 aaPredicted RBP12.71□□□□□ -0.37
MSH5-216ENST00000484309 SLC30A5Q8TAD4 765 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 TCEAL3Q969E4 200 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 LOXL4Q96JB6 756 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 MRGPRX1Q96LB2 322 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 PCDHB18PQ96TA0 734 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 TBCBQ99426 244 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 NPY6RQ99463 290 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 METTL5Q9NRN9 209 aaKnown RBP12.71□□□□□ -0.37
MSH5-216ENST00000484309 PIGVQ9NUD9 493 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 SEPT11Q9NVA2 429 aaKnown RBP12.71□□□□□ -0.37
MSH5-216ENST00000484309 SNX10Q9Y5X0 201 aa12.71□□□□□ -0.37
MSH5-216ENST00000484309 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.7□□□□□ -0.38
MSH5-216ENST00000484309 H0Y626 953 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 SYNCRIPO60506 623 aaKnown RBP12.7□□□□□ -0.38
MSH5-216ENST00000484309 LRP3O75074 770 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 PAGE1O75459 146 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 ADCY5O95622 1261 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 CYP1A1P04798 512 aaPredicted RBP12.7□□□□□ -0.38
MSH5-216ENST00000484309 POLR2EP19388 210 aaKnown RBP12.7□□□□□ -0.38
MSH5-216ENST00000484309 PTGER3P43115 390 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms