RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 CHSY1Q86X52 802 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 SUMF1Q8NBK3 374 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 TSTD1Q8NFU3 115 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 VCPIP1Q96JH7 1222 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 TBCBQ99426 244 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 XPO4Q9C0E2 1151 aaKnown RBP18.64■□□□□ 0.57
HDAC6-225ENST00000483506 HAUS4Q9H6D7 363 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 CD248Q9HCU0 757 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 SEPT11Q9NVA2 429 aaKnown RBP18.64■□□□□ 0.57
HDAC6-225ENST00000483506 THAP10Q9P2Z0 257 aaPredicted RBP18.64■□□□□ 0.57
HDAC6-225ENST00000483506 CAPN11Q9UMQ6 739 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 PAXBP1Q9Y5B6 917 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 FAM186AA6NE01 2351 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 SYNJ2BP-COX16A0A087WUM0 186 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 C2CD4BA6NLJ0 364 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 GZMAP12544 262 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 PTPN9P43378 593 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 ZBED6P86452 979 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 C5orf22Q49AR2 442 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 ACBD5Q5T8D3 534 aaPredicted RBP18.63■□□□□ 0.57
HDAC6-225ENST00000483506 TTC39BQ5VTQ0 682 aaPredicted RBP18.63■□□□□ 0.57
HDAC6-225ENST00000483506 TMEM215Q68D42 235 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 HEATR6Q6AI08 1181 aaKnown RBP18.63■□□□□ 0.57
HDAC6-225ENST00000483506 ZNF571Q7Z3V5 609 aaPredicted RBP18.63■□□□□ 0.57
HDAC6-225ENST00000483506 LGI2Q8N0V4 545 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 FIBINQ8TAL6 211 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 WFDC5Q8TCV5 224 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 UCMAQ8WVF2 138 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 RNF34Q969K3 372 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 CFAP57Q96MR6 1250 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 ZDHHC4Q9NPG8 344 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 ELOVL2Q9NXB9 296 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 COX16Q9P0S2 106 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 ZNF292O60281 2723 aa18.63■□□□□ 0.57
HDAC6-225ENST00000483506 GVINP1Q7Z2Y8 2422 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 FRYLO94915 3013 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 F5H5T6 163 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 I6L893 689 aaPredicted RBP18.62■□□□□ 0.57
HDAC6-225ENST00000483506 AXIN1O15169 862 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 CBFA2T2O43439 604 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 HRO43593 1189 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 GFRA3O60609 400 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 PAGE1O75459 146 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 LUC7L3O95232 432 aaKnown RBP18.62■□□□□ 0.57
HDAC6-225ENST00000483506 ADCY5O95622 1261 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 GYPCP04921 128 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 PABPC1P11940 636 aaKnown RBP18.62■□□□□ 0.57
HDAC6-225ENST00000483506 KRT3P12035 628 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 TNFAIP3P21580 790 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 RDXP35241 583 aaKnown RBP18.62■□□□□ 0.57
HDAC6-225ENST00000483506 DEUP1Q05D60 604 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 KLHL30Q0D2K2 578 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 HGSNATQ68CP4 663 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 SND1Q7KZF4 910 aaKnown RBP eCLIP18.62■□□□□ 0.57
HDAC6-225ENST00000483506 ADIPOR2Q86V24 386 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 ALYREFQ86V81 257 aaKnown RBP18.62■□□□□ 0.57
HDAC6-225ENST00000483506 MFN1Q8IWA4 741 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 MCOLN2Q8IZK6 566 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 AHI1Q8N157 1196 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 EMC1Q8N766 993 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 ACOX2Q99424 681 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 WDCPQ9H6R7 721 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 POLMQ9NP87 494 aaPredicted RBP18.62■□□□□ 0.57
HDAC6-225ENST00000483506 ANLNQ9NQW6 1124 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 ABCB8Q9NUT2 735 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 TAS2R14Q9NYV8 317 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 GGA2Q9UJY4 613 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 HS3ST4Q9Y661 456 aa18.62■□□□□ 0.57
HDAC6-225ENST00000483506 CKAP5Q14008 2032 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 A0A1W2PQF6 199 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 SIGLEC16A6NMB1 481 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 HOXB2P14652 356 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 PDGFRAP16234 1089 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 SDC4P31431 198 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 PXNP49023 591 aaPredicted RBP18.61■□□□□ 0.57
HDAC6-225ENST00000483506 AUHQ13825 339 aaKnown RBP18.61■□□□□ 0.57
HDAC6-225ENST00000483506 CCDC14Q49A88 953 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 RABGAP1LQ5R372 815 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 PPP1R15BQ5SWA1 713 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 FBXL22Q6P050 247 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 CHPFQ8IZ52 775 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 JOSD2Q8TAC2 188 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 GAB3Q8WWW8 586 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 RXFP2Q8WXD0 754 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 CENPIQ92674 756 aaPredicted RBP18.61■□□□□ 0.57
HDAC6-225ENST00000483506 C1orf74Q96LT6 269 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 TKTL2Q9H0I9 626 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 SMG5Q9UPR3 1016 aaKnown RBP18.61■□□□□ 0.57
HDAC6-225ENST00000483506 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.61■□□□□ 0.57
HDAC6-225ENST00000483506 BZW2Q9Y6E2 419 aaKnown RBP18.61■□□□□ 0.57
HDAC6-225ENST00000483506 EP300Q09472 2414 aaPredicted RBP18.61■□□□□ 0.57
HDAC6-225ENST00000483506 PLXND1Q9Y4D7 1925 aa18.61■□□□□ 0.57
HDAC6-225ENST00000483506 SPAG17Q6Q759 2223 aa18.6■□□□□ 0.57
HDAC6-225ENST00000483506 DDX3XO00571 662 aaKnown RBP eCLIP18.6■□□□□ 0.57
HDAC6-225ENST00000483506 ALDH1A2O94788 518 aa18.6■□□□□ 0.57
HDAC6-225ENST00000483506 CD70P32970 193 aa18.6■□□□□ 0.57
HDAC6-225ENST00000483506 RFC1P35251 1148 aaPredicted RBP18.6■□□□□ 0.57
HDAC6-225ENST00000483506 ATXN1P54253 815 aaKnown RBP18.6■□□□□ 0.57
HDAC6-225ENST00000483506 LMAN2Q12907 356 aa18.6■□□□□ 0.57
HDAC6-225ENST00000483506 CDH18Q13634 790 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms