RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 HMX2A2RU54 273 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 PRKCHP24723 683 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 STT3AP46977 705 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 GABRB2P47870 512 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 TMCO4Q5TGY1 634 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 UGT2A3Q6UWM9 527 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 NUDCD3Q8IVD9 361 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 C1orf127Q8N9H9 656 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.76□□□□□ -0.37
CCDC78-213ENST00000482878 RXFP2Q8WXD0 754 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 GPAMQ9HCL2 828 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 PTPRHQ9HD43 1115 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 INPP5FQ9Y2H2 1132 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 ADM5C9JUS6 153 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 NDUFB5O43674 189 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 HMGCRP04035 888 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 NFICP08651 508 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 SMIM18P0DKX4 95 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 OSBPP22059 807 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 SLC5A2P31639 672 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 TCHHL1Q5QJ38 904 aaPredicted RBP12.76□□□□□ -0.37
CCDC78-213ENST00000482878 MPZL3Q6UWV2 235 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 ZCCHC23Q6ZST2 131 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 EBF4Q9BQW3 602 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 SLC15A5A6NIM6 579 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 SRGAP2BP0DMP2 458 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 PDGFRAP16234 1089 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 GPD1P21695 349 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 PROZP22891 400 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 ENTPD1P49961 510 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 ITGA7Q13683 1181 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 HNRNPDQ14103 355 aaKnown RBP12.75□□□□□ -0.37
CCDC78-213ENST00000482878 TFDP2Q14188 446 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 MROH9Q5TGP6 573 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 IER5Q5VY09 327 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 ATG16L1Q676U5 607 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 UNC5AQ6ZN44 842 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 CATSPERGQ6ZRH7 1159 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 ZBTB8OSQ8IWT0 167 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 PQLC3Q8N755 202 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 TRAPPC12Q8WVT3 735 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 TMEM176AQ96HP8 235 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 ZFRQ96KR1 1074 aaKnown RBP12.75□□□□□ -0.37
CCDC78-213ENST00000482878 AK5Q9Y6K8 562 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 C2CD4BA6NLJ0 364 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 PRR5-ARHGAP8B1AHC4 643 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 SPTLC1O15269 473 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 CILPO75339 1184 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 APOEP02649 317 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 RXRGP48443 463 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 ARHGAP8P85298 464 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 UBAP2LQ14157 1087 aaKnown RBP12.75□□□□□ -0.37
CCDC78-213ENST00000482878 GRM2Q14416 872 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 TLR1Q15399 786 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 FAM47CQ5HY64 1035 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 ATF7IP2Q5U623 682 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 TMC7Q7Z402 723 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 MPP5Q8N3R9 675 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 GALNT4Q8N4A0 578 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 CNPY3Q9BT09 278 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 CCDC106Q9BWC9 280 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 RRN3Q9NYV6 651 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 RNF181Q9P0P0 153 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 DNAJB4Q9UDY4 337 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 NFKBIEO00221 500 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 PRPSAP2O60256 369 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 ITGB3P05106 788 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 COL6A2P12110 1019 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 FDFT1P37268 417 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 GJC2Q5T442 439 aaPredicted RBP12.75□□□□□ -0.37
CCDC78-213ENST00000482878 SCYL2Q6P3W7 929 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 NDUFAF2Q8N183 169 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 DCPSQ96C86 337 aaKnown RBP12.75□□□□□ -0.37
CCDC78-213ENST00000482878 C12orf42Q96LP6 360 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 HEXIM2Q96MH2 286 aaKnown RBP12.75□□□□□ -0.37
CCDC78-213ENST00000482878 DCUN1D5Q9BTE7 237 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 WWP1Q9H0M0 922 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 EPB41L1Q9H4G0 881 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 TMEM98Q9Y2Y6 226 aa12.75□□□□□ -0.37
CCDC78-213ENST00000482878 TRDMT1O14717 391 aaKnown RBP12.74□□□□□ -0.37
CCDC78-213ENST00000482878 SNNO75324 88 aaPredicted RBP12.74□□□□□ -0.37
CCDC78-213ENST00000482878 ZBED1O96006 694 aa12.74□□□□□ -0.37
CCDC78-213ENST00000482878 ATP1A4Q13733 1029 aa12.74□□□□□ -0.37
CCDC78-213ENST00000482878 C6orf183Q5T699 404 aa12.74□□□□□ -0.37
CCDC78-213ENST00000482878 LGSNQ5TDP6 509 aa12.74□□□□□ -0.37
CCDC78-213ENST00000482878 MAP1SQ66K74 1059 aaPredicted RBP12.74□□□□□ -0.37
CCDC78-213ENST00000482878 FAM183BPQ6ZVS7 135 aa12.74□□□□□ -0.37
CCDC78-213ENST00000482878 AMIGO2Q86SJ2 522 aa12.74□□□□□ -0.37
CCDC78-213ENST00000482878 DNERQ8NFT8 737 aa12.74□□□□□ -0.37
CCDC78-213ENST00000482878 RTP4Q96DX8 246 aa12.74□□□□□ -0.37
CCDC78-213ENST00000482878 MRPS26Q9BYN8 205 aaKnown RBP12.74□□□□□ -0.37
CCDC78-213ENST00000482878 ARMC7Q9H6L4 198 aa12.74□□□□□ -0.37
CCDC78-213ENST00000482878 TBCCD1Q9NVR7 557 aa12.74□□□□□ -0.37
CCDC78-213ENST00000482878 COL11A1P12107 1806 aaPredicted RBP12.74□□□□□ -0.37
CCDC78-213ENST00000482878 ZBTB42B2RXF5 422 aa12.74□□□□□ -0.37
CCDC78-213ENST00000482878 BTBD19C9JJ37 291 aa12.74□□□□□ -0.37
CCDC78-213ENST00000482878 FBP2O00757 339 aa12.74□□□□□ -0.37
CCDC78-213ENST00000482878 SORBS2O94875 1100 aaKnown RBP12.74□□□□□ -0.37
CCDC78-213ENST00000482878 TNFAIP8O95379 198 aa12.74□□□□□ -0.37
CCDC78-213ENST00000482878 C6orf222P0C671 652 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms