RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 MFAP3LO75121 409 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 PAGE1O75459 146 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 GJB6O95452 261 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 ADCY5O95622 1261 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 PLEKP08567 350 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-214ENST00000482733 HOXA6P31267 233 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 TIE1P35590 1138 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 SGSHP51688 502 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 ZNF143P52747 638 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-214ENST00000482733 TBX2Q13207 712 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-214ENST00000482733 MAMLD1Q13495 774 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 ARL13BQ3SXY8 428 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 EOGTQ5NDL2 527 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 PKN3Q6P5Z2 889 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 TMC6Q7Z403 805 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 MFN1Q8IWA4 741 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 SFTPA1Q8IWL2 248 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.16■□□□□ 0.34
HMGN1-214ENST00000482733 ZNF513Q8N8E2 541 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-214ENST00000482733 FIBINQ8TAL6 211 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 UCMAQ8WVF2 138 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 CENPIQ92674 756 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-214ENST00000482733 C1orf74Q96LT6 269 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 MCEEQ96PE7 176 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 HAPLN3Q96S86 360 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 MRPL47Q9HD33 250 aaKnown RBP17.16■□□□□ 0.34
HMGN1-214ENST00000482733 ABHD10Q9NUJ1 306 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 STIM2Q9P246 746 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 CNOT8Q9UFF9 292 aaKnown RBP17.16■□□□□ 0.34
HMGN1-214ENST00000482733 CLEC4EQ9ULY5 219 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 MMP17Q9ULZ9 603 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 HS3ST4Q9Y661 456 aa17.16■□□□□ 0.34
HMGN1-214ENST00000482733 WDFY4Q6ZS81 3184 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 SSU72P8A0A1W2PR75 194 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 PRRT4C9JH25 899 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 AKR1B15C9JRZ8 316 aaPredicted RBP17.15■□□□□ 0.34
HMGN1-214ENST00000482733 LUC7L3O95232 432 aaKnown RBP17.15■□□□□ 0.34
HMGN1-214ENST00000482733 TDGF1P13385 188 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 ZNF75DP51815 510 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 RPS24P62847 133 aaKnown RBP17.15■□□□□ 0.34
HMGN1-214ENST00000482733 CDH18Q13634 790 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 AUHQ13825 339 aaKnown RBP17.15■□□□□ 0.34
HMGN1-214ENST00000482733 DMC1Q14565 340 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 CDO1Q16878 200 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 C15orf59Q2T9L4 293 aaPredicted RBP17.15■□□□□ 0.34
HMGN1-214ENST00000482733 SDE2Q6IQ49 451 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 FBXL22Q6P050 247 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 ZC3H14Q6PJT7 736 aaKnown RBP17.15■□□□□ 0.34
HMGN1-214ENST00000482733 FAM131BQ86XD5 332 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 AHI1Q8N157 1196 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 CAMKK1Q8N5S9 505 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 IL17RCQ8NAC3 791 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 FAM172AQ8WUF8 416 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 ZNF653Q96CK0 615 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 CNPY3Q9BT09 278 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 ZSCAN32Q9NX65 697 aa17.15■□□□□ 0.34
HMGN1-214ENST00000482733 A0A087X0T9 212 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 K7ESF4 209 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 KLF8O95600 359 aaPredicted RBP17.14■□□□□ 0.33
HMGN1-214ENST00000482733 FAM228BP0C875 321 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 CHRM1P11229 460 aaPredicted RBP17.14■□□□□ 0.33
HMGN1-214ENST00000482733 HNRNPLP14866 589 aaKnown RBP eCLIP17.14■□□□□ 0.33
HMGN1-214ENST00000482733 HLA-FP30511 346 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 EIF4A3P38919 411 aaKnown RBP17.14■□□□□ 0.33
HMGN1-214ENST00000482733 ATXN1P54253 815 aaKnown RBP17.14■□□□□ 0.33
HMGN1-214ENST00000482733 ADKP55263 362 aaKnown RBP17.14■□□□□ 0.33
HMGN1-214ENST00000482733 OXCT1P55809 520 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 RPL7AP62424 266 aaKnown RBP17.14■□□□□ 0.33
HMGN1-214ENST00000482733 MAPK8IP2Q13387 824 aaPredicted RBP17.14■□□□□ 0.33
HMGN1-214ENST00000482733 GEN1Q17RS7 908 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 C5orf22Q49AR2 442 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 CCDC122Q5T0U0 273 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 EMC10Q5UCC4 262 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 ALKBH5Q6P6C2 394 aaKnown RBP17.14■□□□□ 0.33
HMGN1-214ENST00000482733 TSSK4Q6SA08 328 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 LRRC31Q6UY01 552 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 KIAA0907Q7Z7F0 614 aaPredicted RBP17.14■□□□□ 0.33
HMGN1-214ENST00000482733 CFAP52Q8N1V2 620 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 CARNMT1Q8N4J0 409 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 ALLCQ8N6M5 410 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 TXNDC5Q8NBS9 432 aaKnown RBP17.14■□□□□ 0.33
HMGN1-214ENST00000482733 FNIP1Q8TF40 1166 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 NELL1Q92832 810 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 MYEOVQ96EZ4 313 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 RPRD1AQ96P16 312 aaPredicted RBP17.14■□□□□ 0.33
HMGN1-214ENST00000482733 SIK2Q9H0K1 926 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 DEF6Q9H4E7 631 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 ABCB8Q9NUT2 735 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 ELOVL2Q9NXB9 296 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 GGA2Q9UJY4 613 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 PCDHGA2Q9Y5H1 932 aa17.14■□□□□ 0.33
HMGN1-214ENST00000482733 CCDC163A0A0D9SF12 145 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 A0A1B0GVM2 712 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 TCAF2A6NFQ2 919 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 H0Y626 953 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 PABPC1P11940 636 aaKnown RBP17.13■□□□□ 0.33
HMGN1-214ENST00000482733 NTSR1P30989 418 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 DGKEP52429 567 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 HDAC4P56524 1084 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 NHLH1Q02575 133 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms