RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 ARL8BQ9NVJ2 186 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 GAR1Q9NY12 217 aaKnown RBP4.3□□□□□ -1.72
CBX3-207ENST00000481300 SERGEFQ9UGK8 458 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 KCND3Q9UK17 655 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 HEMK1Q9Y5R4 338 aaPredicted RBP4.3□□□□□ -1.72
CBX3-207ENST00000481300 TOP2AP11388 1531 aaKnown RBP4.3□□□□□ -1.72
CBX3-207ENST00000481300 CCDC88BA6NC98 1476 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 WIZO95785 1651 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 SPATA31A1Q5TZJ5 1347 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 PEG3Q9GZU2 1588 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 TCRBV5S1A1TA0A578 114 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 EIF3FO00303 357 aaPredicted RBP4.29□□□□□ -1.72
CBX3-207ENST00000481300 SEPT4O43236 478 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 PROP1O75360 226 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 RNF8O76064 485 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 TFRCP02786 760 aaKnown RBP4.29□□□□□ -1.72
CBX3-207ENST00000481300 TK1P04183 234 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 RXRAP19793 462 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 NDUFS1P28331 727 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 AGTR2P50052 363 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 TAS2R50P59544 299 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 KRTAP10-11P60412 298 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 FOXF2Q12947 444 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 PDCLQ13371 301 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 TMEM119Q4V9L6 283 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 GLE1Q53GS7 698 aaKnown RBP4.29□□□□□ -1.72
CBX3-207ENST00000481300 TMEM88Q6PEY1 159 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 RANBP10Q6VN20 620 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 KYAT3Q6YP21 454 aaKnown RBP4.29□□□□□ -1.72
CBX3-207ENST00000481300 SYNE3Q6ZMZ3 975 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 GLCCI1Q86VQ1 547 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 ADPRHL1Q8NDY3 354 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 RILPL2Q969X0 211 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 PIGSQ96S52 555 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 NUAK2Q9H093 628 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 CHODLQ9H9P2 273 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 PRDM16Q9HAZ2 1276 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 G6PC2Q9NQR9 355 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 ASNSD1Q9NWL6 643 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 RRN3Q9NYV6 651 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 FEM1BQ9UK73 627 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 GTF2A1LQ9UNN4 478 aa4.29□□□□□ -1.72
CBX3-207ENST00000481300 AGAP5A6NIR3 686 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 B9A039 149 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 HNRNPRO43390 633 aaKnown RBP4.28□□□□□ -1.72
CBX3-207ENST00000481300 CYP3A4P08684 503 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 CDK4P11802 303 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 PEPDP12955 493 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 RCAN1P53805 252 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 FAM3BP58499 235 aaPredicted RBP4.28□□□□□ -1.72
CBX3-207ENST00000481300 SLC14A1Q13336 389 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 KPNB1Q14974 876 aaKnown RBP4.28□□□□□ -1.72
CBX3-207ENST00000481300 SMAD1Q15797 465 aaKnown RBP4.28□□□□□ -1.72
CBX3-207ENST00000481300 AWAT1Q58HT5 328 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 SLC39A5Q6ZMH5 540 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 CHSY1Q86X52 802 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 LAS2Q8IYD9 372 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 FSIP1Q8NA03 581 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 CEP70Q8NHQ1 597 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 ASB12Q8WXK4 309 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 TRMT61AQ96FX7 289 aaKnown RBP4.28□□□□□ -1.72
CBX3-207ENST00000481300 KAZALD1Q96I82 304 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 RITA1Q96K30 269 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 UBXN10Q96LJ8 280 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 COG8Q96MW5 612 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 ASB2Q96Q27 587 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 SENP7Q9BQF6 1050 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 NOD2Q9HC29 1040 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 DERAQ9Y315 318 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 RRP7AQ9Y3A4 280 aaKnown RBP4.28□□□□□ -1.72
CBX3-207ENST00000481300 PCDHA10Q9Y5I2 948 aa4.28□□□□□ -1.72
CBX3-207ENST00000481300 SIRT4Q9Y6E7 314 aaPredicted RBP4.28□□□□□ -1.72
CBX3-207ENST00000481300 PRYO14603 147 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 HEXIM1O94992 359 aaKnown RBP4.27□□□□□ -1.73
CBX3-207ENST00000481300 CYP2D6P10635 497 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 ATF7P17544 494 aaPredicted RBP4.27□□□□□ -1.73
CBX3-207ENST00000481300 HOXD12P35452 270 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 STAT6P42226 847 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 PROK1P58294 105 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 TUBA4AP68366 448 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 GAB1Q13480 694 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 EFR3AQ14156 821 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 PROSER3Q2NL68 480 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 PAPD7Q5XG87 772 aaKnown RBP4.27□□□□□ -1.73
CBX3-207ENST00000481300 CYP26C1Q6V0L0 522 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 SRRM1Q8IYB3 904 aaKnown RBP4.27□□□□□ -1.73
CBX3-207ENST00000481300 SLC2A12Q8TD20 617 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 USP13Q92995 863 aaPredicted RBP4.27□□□□□ -1.73
CBX3-207ENST00000481300 HTATIP2Q9BUP3 242 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 TWSG1Q9GZX9 223 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 PDE11AQ9HCR9 933 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 RIC8AQ9NPQ8 531 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 SEMA5BQ9P283 1151 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 B3GNT3Q9Y2A9 372 aa4.27□□□□□ -1.73
CBX3-207ENST00000481300 COPG1Q9Y678 874 aaKnown RBP4.27□□□□□ -1.73
CBX3-207ENST00000481300 KAT6AQ92794 2004 aa4.26□□□□□ -1.73
CBX3-207ENST00000481300 COL3A1P02461 1466 aaPredicted RBP4.26□□□□□ -1.73
CBX3-207ENST00000481300 CC2D2AQ9P2K1 1620 aa4.26□□□□□ -1.73
CBX3-207ENST00000481300 RRN3P2A6NIE6 340 aa4.26□□□□□ -1.73
CBX3-207ENST00000481300 FAM90A20PA6NIJ5 464 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms