RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 WASF3Q9UPY6 502 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 NAALADL1Q9UQQ1 740 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 CAPN9O14815 690 aa15.83■□□□□ 0.12
LIMS3-203ENST00000480744 IRAK2O43187 625 aa15.83■□□□□ 0.12
LIMS3-203ENST00000480744 SART1O43290 800 aaKnown RBP15.83■□□□□ 0.12
LIMS3-203ENST00000480744 LETM1O95202 739 aaPredicted RBP15.83■□□□□ 0.12
LIMS3-203ENST00000480744 FGFR1OPO95684 399 aaKnown RBP15.83■□□□□ 0.12
LIMS3-203ENST00000480744 IGLV3-19P01714 112 aa15.83■□□□□ 0.12
LIMS3-203ENST00000480744 DLDP09622 509 aaKnown RBP15.83■□□□□ 0.12
LIMS3-203ENST00000480744 FAM193AP78312 1265 aa15.83■□□□□ 0.12
LIMS3-203ENST00000480744 PTPRNQ16849 979 aa15.83■□□□□ 0.12
LIMS3-203ENST00000480744 MPP7Q5T2T1 576 aa15.83■□□□□ 0.12
LIMS3-203ENST00000480744 KIAA0907Q7Z7F0 614 aaPredicted RBP15.83■□□□□ 0.12
LIMS3-203ENST00000480744 CCDC117Q8IWD4 279 aaPredicted RBP15.83■□□□□ 0.12
LIMS3-203ENST00000480744 CARNMT1Q8N4J0 409 aa15.83■□□□□ 0.12
LIMS3-203ENST00000480744 FCRL2Q96LA5 508 aaPredicted RBP15.83■□□□□ 0.12
LIMS3-203ENST00000480744 PRICKLE1Q96MT3 831 aaPredicted RBP15.83■□□□□ 0.12
LIMS3-203ENST00000480744 CAMK1GQ96NX5 476 aa15.83■□□□□ 0.12
LIMS3-203ENST00000480744 CRACR2AQ9BSW2 395 aa15.83■□□□□ 0.12
LIMS3-203ENST00000480744 BCAT2O15382 392 aaPredicted RBP15.82■□□□□ 0.12
LIMS3-203ENST00000480744 THAP12O43422 761 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 MED7O43513 233 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 SH3BP5O60239 455 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 DNTTP04053 509 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 FYNP06241 537 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 RDXP35241 583 aaKnown RBP15.82■□□□□ 0.12
LIMS3-203ENST00000480744 USP8P40818 1118 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 GPD2P43304 727 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 ACADSBP45954 432 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 MARSP56192 900 aaKnown RBP15.82■□□□□ 0.12
LIMS3-203ENST00000480744 RPS24P62847 133 aaKnown RBP15.82■□□□□ 0.12
LIMS3-203ENST00000480744 GJB7Q6PEY0 223 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 TAC4Q86UU9 113 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 CFAP52Q8N1V2 620 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 ZNF557Q8N988 423 aaPredicted RBP15.82■□□□□ 0.12
LIMS3-203ENST00000480744 AZIN2Q96A70 460 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 MYEOVQ96EZ4 313 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 IRX2Q9BZI1 471 aaPredicted RBP15.82■□□□□ 0.12
LIMS3-203ENST00000480744 ZDHHC5Q9C0B5 715 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 NUCKS1Q9H1E3 243 aaKnown RBP15.82■□□□□ 0.12
LIMS3-203ENST00000480744 MTG2Q9H4K7 406 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 C6orf106Q9H6K1 298 aaPredicted RBP15.82■□□□□ 0.12
LIMS3-203ENST00000480744 PRSS16Q9NQE7 514 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 TLR6Q9Y2C9 796 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 NFE2L3Q9Y4A8 694 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 PCDHB9Q9Y5E1 797 aa15.82■□□□□ 0.12
LIMS3-203ENST00000480744 E5RJQ4 531 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 GJB3O75712 270 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 APOEP02649 317 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 GNA15P30679 374 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 ACSL1P33121 698 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 ST8SIA6P61647 398 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 RPS14P62263 151 aaKnown RBP15.81■□□□□ 0.12
LIMS3-203ENST00000480744 SLC14A1Q13336 389 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 CDH18Q13634 790 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 CAMK4Q16566 473 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 ARHGAP44Q17R89 818 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 TTC31Q49AM3 519 aaPredicted RBP15.81■□□□□ 0.12
LIMS3-203ENST00000480744 SYPL2Q5VXT5 272 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 NAXDQ8IW45 347 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 FIBINQ8TAL6 211 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 GANCQ8TET4 914 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 TRIM62Q9BVG3 475 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 FBRSQ9HAH7 460 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 ACP6Q9NPH0 428 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 SUN2Q9UH99 717 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 KLK13Q9UKR3 277 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 CNTN6Q9UQ52 1028 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 AKAP13Q12802 2813 aa15.81■□□□□ 0.12
LIMS3-203ENST00000480744 PLXNA2O75051 1894 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 H0Y626 953 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 PAPSS1O43252 624 aaPredicted RBP15.8■□□□□ 0.12
LIMS3-203ENST00000480744 SEMA4FO95754 770 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 CER1O95813 267 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 CSKP41240 450 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 NNTQ13423 1086 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 HNRNPDQ14103 355 aaKnown RBP15.8■□□□□ 0.12
LIMS3-203ENST00000480744 TRIP6Q15654 476 aaKnown RBP15.8■□□□□ 0.12
LIMS3-203ENST00000480744 DCAF6Q58WW2 860 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 ZC3H12AQ5D1E8 599 aaKnown RBP15.8■□□□□ 0.12
LIMS3-203ENST00000480744 MS4A13Q5J8X5 152 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 ZNF776Q68DI1 518 aaPredicted RBP15.8■□□□□ 0.12
LIMS3-203ENST00000480744 TRIM65Q6PJ69 517 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 MMS22LQ6ZRQ5 1243 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 ENOSF1Q7L5Y1 443 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 CHSY1Q86X52 802 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 LGI2Q8N0V4 545 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 ZNF606Q8WXB4 792 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 SLC39A13Q96H72 371 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 SLC4A5Q9BY07 1137 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 BTBD1Q9H0C5 482 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 PCED1AQ9H1Q7 454 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 GAREM1Q9H706 876 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 IL21RQ9HBE5 538 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 CYTH4Q9UIA0 394 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 XPO7Q9UIA9 1087 aaKnown RBP15.8■□□□□ 0.12
LIMS3-203ENST00000480744 ZMIZ1Q9ULJ6 1067 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 NEUROG3Q9Y4Z2 214 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 CEP83Q9Y592 693 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 IGF2RP11717 2491 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms