RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 CCSER2Q9H7U1 834 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 VRTNQ9H8Y1 702 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 TM9SF3Q9HD45 589 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 TMEM30AQ9NV96 361 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 COMMD8Q9NX08 183 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 RAB20Q9NX57 234 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 CHORDC1Q9UHD1 332 aaPredicted RBP16.3■□□□□ 0.2
HDLBP-238ENST00000479894 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.3■□□□□ 0.2
HDLBP-238ENST00000479894 COQ4Q9Y3A0 265 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 PLXNA2O75051 1894 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 FAM92AA1XBS5 289 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 TACC1O75410 805 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 C7P10643 843 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 C6P13671 934 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 CTSKP43235 329 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 CACNA2D1P54289 1103 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 UCNP55089 124 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 TNNC1P63316 161 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 PPP3CAQ08209 521 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 TBC1D25Q3MII6 688 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 ZNF667Q5HYK9 610 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 HES3Q5TGS1 186 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 FBXL19Q6PCT2 694 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 GBP6Q6ZN66 633 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 TPGS1Q6ZTW0 290 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 PLEKHO2Q8TD55 490 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 SNX19Q92543 992 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 ZNF516Q92618 1163 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 NACA2Q9H009 215 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 MMRN2Q9H8L6 949 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 LSM7Q9UK45 103 aaKnown RBP16.29■□□□□ 0.2
HDLBP-238ENST00000479894 DAAM1Q9Y4D1 1078 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 SLCO1B1Q9Y6L6 691 aa16.29■□□□□ 0.2
HDLBP-238ENST00000479894 A0A1B0GTQ1 180 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 BRINP1O60477 761 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 LDOC1O95751 146 aaPredicted RBP16.28■□□□□ 0.2
HDLBP-238ENST00000479894 SERPINC1P01008 464 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 HLA-DRAP01903 254 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 IRF1P10914 325 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 GNL1P36915 607 aaPredicted RBP16.28■□□□□ 0.2
HDLBP-238ENST00000479894 COPAP53621 1224 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 YWHAEP62258 255 aaKnown RBP16.28■□□□□ 0.2
HDLBP-238ENST00000479894 SRSF1Q07955 248 aaKnown RBP eCLIP16.28■□□□□ 0.2
HDLBP-238ENST00000479894 GOLGA8FQ08AF8 430 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 GOLGA8DPQ0D2H9 430 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 ILKQ13418 452 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 ZNF699Q32M78 642 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 C1orf220Q5T0J3 134 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 LUZP1Q86V48 1076 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 ERICH1Q86X53 443 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 FMNL3Q8IVF7 1028 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 HNRNPABQ99729 332 aaKnown RBP16.28■□□□□ 0.2
HDLBP-238ENST00000479894 ZNF518BQ9C0D4 1074 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 SNX25Q9H3E2 840 aa16.28■□□□□ 0.2
HDLBP-238ENST00000479894 PTPRJQ12913 1337 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 KCNK3O14649 394 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 CBFA2T2O43439 604 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 ASS1P00966 412 aaKnown RBP16.27■□□□□ 0.2
HDLBP-238ENST00000479894 PTPN1P18031 435 aaKnown RBP16.27■□□□□ 0.2
HDLBP-238ENST00000479894 TBXAS1P24557 533 aaPredicted RBP16.27■□□□□ 0.2
HDLBP-238ENST00000479894 CD27P26842 260 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 ACADVLP49748 655 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 CDH8P55286 799 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 TMPRSS3P57727 454 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 CCDC173Q0VFZ6 552 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 KRT31Q15323 416 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 EXOC3L4Q17RC7 722 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 ZNF248Q8NDW4 579 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 CNDP2Q96KP4 475 aaKnown RBP16.27■□□□□ 0.2
HDLBP-238ENST00000479894 MMS19Q96T76 1030 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 LGMNQ99538 433 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 KLF16Q9BXK1 252 aaPredicted RBP16.27■□□□□ 0.2
HDLBP-238ENST00000479894 C6orf106Q9H6K1 298 aaPredicted RBP16.27■□□□□ 0.2
HDLBP-238ENST00000479894 CYP3A43Q9HB55 503 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 NME7Q9Y5B8 376 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 DOPEY2Q9Y3R5 2298 aa16.27■□□□□ 0.2
HDLBP-238ENST00000479894 ATP8B3O60423 1300 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 TLR5O60602 858 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 COPB1P53618 953 aaKnown RBP16.26■□□□□ 0.19
HDLBP-238ENST00000479894 SLC5A3P53794 718 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 MYL6P60660 151 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 EIF4HQ15056 248 aaKnown RBP16.26■□□□□ 0.19
HDLBP-238ENST00000479894 WDR72Q3MJ13 1102 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 HSP90AA4PQ58FG1 418 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 BROXQ5VW32 411 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 ENOSF1Q7L5Y1 443 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 EHBP1Q8NDI1 1231 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 OR6B3Q8NGW1 331 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 SCAMP5Q8TAC9 235 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 TAS1R2Q8TE23 839 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 RFFLQ8WZ73 363 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 TSC1Q92574 1164 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 JAKMIP2Q96AA8 810 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 FAM84AQ96KN4 292 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 NT5C1BQ96P26 610 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 MRPL45Q9BRJ2 306 aaKnown RBP16.26■□□□□ 0.19
HDLBP-238ENST00000479894 B3GNT5Q9BYG0 378 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 SEMA4CQ9C0C4 833 aa16.26■□□□□ 0.19
HDLBP-238ENST00000479894 LGALS16A8MUM7 142 aa16.25■□□□□ 0.19
HDLBP-238ENST00000479894 VILLO15195 856 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms