RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 DUS2Q9NX74 493 aaKnown RBP21.78■■□□□ 1.08
SDF4-206ENST00000478938 DNMT3BQ9UBC3 853 aaKnown RBP21.78■■□□□ 1.08
SDF4-206ENST00000478938 FAM86B1E9PN63 330 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 FAM86B2P0C5J1 330 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 MYL4P12829 197 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 CRHR1P34998 444 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 CEP55Q53EZ4 464 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 RFPL4BQ6ZWI9 263 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 ELMOD1Q8N336 334 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 RSAD2Q8WXG1 361 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 BHMTQ93088 406 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 RCN3Q96D15 328 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 GPRC5CQ9NQ84 441 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 VAV3Q9UKW4 847 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 SNX13Q9Y5W8 968 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 H0YJX3 145 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 OPRL1P41146 370 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 NEDD8Q15843 81 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 FSCBQ5H9T9 825 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 UNC45BQ8IWX7 931 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 REM2Q8IYK8 340 aaPredicted RBP21.77■■□□□ 1.08
SDF4-206ENST00000478938 ADAMTS16Q8TE57 1224 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 FAM84AQ96KN4 292 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 RNF38Q9H0F5 515 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 NANOGQ9H9S0 305 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 TOPORSQ9NS56 1045 aaPredicted RBP21.77■■□□□ 1.08
SDF4-206ENST00000478938 MKS1Q9NXB0 559 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 ANKMY1Q9P2S6 941 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 HMX2A2RU54 273 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 TRIM64BA6NI03 449 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 CLOCKO15516 846 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 FARP2O94887 1054 aaPredicted RBP21.77■■□□□ 1.08
SDF4-206ENST00000478938 ADRB2P07550 413 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 CSH1P0DML2 217 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 CSH2P0DML3 217 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 CKMT2P17540 419 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 ME2P23368 584 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 POLR2BP30876 1174 aaKnown RBP21.77■■□□□ 1.08
SDF4-206ENST00000478938 RPL7AP62424 266 aaKnown RBP21.77■■□□□ 1.08
SDF4-206ENST00000478938 SLC9B1Q4ZJI4 515 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 POMGNT1Q8WZA1 660 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 C1orf50Q9BV19 199 aa21.77■■□□□ 1.08
SDF4-206ENST00000478938 TP63Q9H3D4 680 aaPredicted RBP21.77■■□□□ 1.08
SDF4-206ENST00000478938 PSME4Q14997 1843 aa21.77■■□□□ 1.07
SDF4-206ENST00000478938 TAF1P21675 1872 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 MYH9P35579 1960 aaKnown RBP21.76■■□□□ 1.07
SDF4-206ENST00000478938 ACOT8O14734 319 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 CHMP2AO43633 222 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 CLPXO76031 633 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 BCL10O95999 233 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 SERPINB2P05120 415 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 CYP19A1P11511 503 aaPredicted RBP21.76■■□□□ 1.07
SDF4-206ENST00000478938 QARSP47897 775 aaKnown RBP21.76■■□□□ 1.07
SDF4-206ENST00000478938 NKX1-1Q15270 411 aaPredicted RBP21.76■■□□□ 1.07
SDF4-206ENST00000478938 CARTPTQ16568 116 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 TFDP3Q5H9I0 405 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 NHSL2Q5HYW2 709 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 C16orf86Q6ZW13 317 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 FAM71DQ8N9W8 422 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 CYP2W1Q8TAV3 490 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 ADAM32Q8TC27 787 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 PI4K2AQ9BTU6 479 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 DHX33Q9H6R0 707 aaKnown RBP21.76■■□□□ 1.07
SDF4-206ENST00000478938 TBC1D22BQ9NU19 505 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 KLQ9UEF7 1012 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 K7ENM7 598 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 CCNA2P20248 432 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 PIK3R1P27986 724 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 INAVAQ3KP66 663 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 SLC27A3Q5K4L6 730 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 LIN9Q5TKA1 542 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 TAS1R2Q8TE23 839 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 NT5C1BQ96P26 610 aa21.76■■□□□ 1.07
SDF4-206ENST00000478938 NXF1Q9UBU9 619 aaKnown RBP21.76■■□□□ 1.07
SDF4-206ENST00000478938 CTDP1Q9Y5B0 961 aaPredicted RBP21.76■■□□□ 1.07
SDF4-206ENST00000478938 MSH4O15457 936 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 MSI1O43347 362 aaKnown RBP21.75■■□□□ 1.07
SDF4-206ENST00000478938 NOL3O60936 208 aaKnown RBP21.75■■□□□ 1.07
SDF4-206ENST00000478938 CDKN2BP42772 138 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 PIGBQ92521 554 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 SLC4A9Q96Q91 983 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 HSPBP1Q9NZL4 362 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 EMCNQ9ULC0 261 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 MINPP1Q9UNW1 487 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 ERVV-1B6SEH8 477 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 ZBTB7AO95365 584 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 AMHP03971 560 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 BMPR1AP36894 532 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 ECE1P42892 770 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 TBC1D10BQ4KMP7 808 aaPredicted RBP21.75■■□□□ 1.07
SDF4-206ENST00000478938 WDR45BQ5MNZ6 344 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 FRA10AC1Q70Z53 315 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 AGR3Q8TD06 166 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 COG4Q9H9E3 785 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 PCDHB2Q9Y5E7 798 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 PCDHGA11Q9Y5H2 935 aa21.75■■□□□ 1.07
SDF4-206ENST00000478938 LOC105371267A0A1B0GV96 52 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 FAM155AB1AL88 458 aaPredicted RBP21.74■■□□□ 1.07
SDF4-206ENST00000478938 F8VP50 259 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 AKAP10O43572 662 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms