RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 SLC39A6Q13433 755 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 RAPGEF1Q13905 1077 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 ZNF268Q14587 947 aaPredicted RBP5.13□□□□□ -1.59
LMBR1-216ENST00000477983 ANKRD1Q15327 319 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 FAM102BQ5T8I3 360 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 ATL3Q6DD88 541 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 PTCHD4Q6ZW05 846 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 MICU3Q86XE3 530 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 ZDHHC17Q8IUH5 632 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 KIAA0319LQ8IZA0 1049 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 NRACQ8N912 160 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 DNAJB14Q8TBM8 379 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 KIAA1524Q8TCG1 905 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 SUCLG2Q96I99 432 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 MMS19Q96T76 1030 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 TRIM5Q9C035 493 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 OGFRQ9NZT2 677 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 CGNQ9P2M7 1197 aaKnown RBP5.13□□□□□ -1.59
LMBR1-216ENST00000477983 CDY1Q9Y6F8 540 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 PHLPP1O60346 1717 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 TTC41PQ6P2S7 1318 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 KDM3BQ7LBC6 1761 aa5.13□□□□□ -1.59
LMBR1-216ENST00000477983 KDM6AO15550 1401 aaPredicted RBP5.13□□□□□ -1.59
LMBR1-216ENST00000477983 SCN11AQ9UI33 1791 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 MBD3L4A6NDZ8 208 aaPredicted RBP5.12□□□□□ -1.59
LMBR1-216ENST00000477983 MBD3L3A6NE82 208 aaPredicted RBP5.12□□□□□ -1.59
LMBR1-216ENST00000477983 MYMKA6NI61 221 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 H3BNC9 293 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 CES2O00748 559 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 CTAGE5O15320 804 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 STX6O43752 255 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 ADCY5O95622 1261 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 HOXB7P09629 217 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 SNHG28P0DPA3 235 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 PSMA5P28066 241 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 PRKAR1BP31321 381 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 CCKBRP32239 447 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 SUMO3P55854 103 aaPredicted RBP5.12□□□□□ -1.59
LMBR1-216ENST00000477983 KRTAP10-7P60409 375 aaPredicted RBP5.12□□□□□ -1.59
LMBR1-216ENST00000477983 GHRHRQ02643 423 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 RBMS2Q15434 407 aaKnown RBP5.12□□□□□ -1.59
LMBR1-216ENST00000477983 INSCQ1MX18 579 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 SHC4Q6S5L8 630 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 DEF8Q6ZN54 512 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 TCEAL8Q8IYN2 117 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 TTC5Q8N0Z6 440 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 CNTROBQ8N137 903 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 LINC01465Q8N7H1 131 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 JDP2Q8WYK2 163 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 ANKRD7Q92527 254 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 WASF1Q92558 559 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 SPSB4Q96A44 273 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 DDX19AQ9NUU7 478 aaKnown RBP5.12□□□□□ -1.59
LMBR1-216ENST00000477983 STK32BQ9NY57 414 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 CHPF2Q9P2E5 772 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 DRG1Q9Y295 367 aaKnown RBP5.12□□□□□ -1.59
LMBR1-216ENST00000477983 PCDH11XQ9BZA7 1347 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 PCDH11YQ9BZA8 1340 aa5.12□□□□□ -1.59
LMBR1-216ENST00000477983 RPAP1Q9BWH6 1393 aaPredicted RBP5.12□□□□□ -1.59
LMBR1-216ENST00000477983 PKD1L3Q7Z443 1732 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 PARP4Q9UKK3 1724 aaKnown RBP5.11□□□□□ -1.59
LMBR1-216ENST00000477983 SIPA1L3O60292 1781 aaPredicted RBP5.11□□□□□ -1.59
LMBR1-216ENST00000477983 COL14A1Q05707 1796 aaKnown RBP5.11□□□□□ -1.59
LMBR1-216ENST00000477983 TRIM43BA6NCK2 446 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 SMTNL1A8MU46 457 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 TSPAN6O43657 245 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 SRGAP2O75044 1071 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 GCATO75600 419 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 ZKSCAN1P17029 563 aaPredicted RBP5.11□□□□□ -1.59
LMBR1-216ENST00000477983 HOXD9P28356 352 aaPredicted RBP5.11□□□□□ -1.59
LMBR1-216ENST00000477983 UQCRC1P31930 480 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 LINC00205P59089 165 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 SRSF1Q07955 248 aaKnown RBP eCLIP5.11□□□□□ -1.59
LMBR1-216ENST00000477983 LMAN2Q12907 356 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 CNN3Q15417 329 aaKnown RBP5.11□□□□□ -1.59
LMBR1-216ENST00000477983 ZNF790Q6PG37 636 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 APOA5Q6Q788 366 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 PIP4P1Q86T03 277 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 ERC1Q8IUD2 1116 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 LIX1LQ8IVB5 337 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 MAGEB6Q8N7X4 407 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 TRIM43Q96BQ3 446 aaPredicted RBP5.11□□□□□ -1.59
LMBR1-216ENST00000477983 KIF1BPQ96EK5 621 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 SIGLEC11Q96RL6 698 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 MEIS3Q99687 375 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 TSPYL1Q9H0U9 437 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 EBF3Q9H4W6 596 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 SACM1LQ9NTJ5 587 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 DNMT3BQ9UBC3 853 aaKnown RBP5.11□□□□□ -1.59
LMBR1-216ENST00000477983 CPNE7Q9UBL6 633 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 DBF4Q9UBU7 674 aaPredicted RBP5.11□□□□□ -1.59
LMBR1-216ENST00000477983 L1RE1Q9UN81 338 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 USP22Q9UPT9 525 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 SMC3Q9UQE7 1217 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 RAD50Q92878 1312 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 USP42Q9H9J4 1324 aaKnown RBP5.11□□□□□ -1.59
LMBR1-216ENST00000477983 PLEKHG2Q9H7P9 1386 aa5.11□□□□□ -1.59
LMBR1-216ENST00000477983 COL16A1Q07092 1604 aaPredicted RBP5.11□□□□□ -1.59
LMBR1-216ENST00000477983 COL22A1Q8NFW1 1626 aaPredicted RBP5.11□□□□□ -1.59
LMBR1-216ENST00000477983 ADAMTS7Q9UKP4 1686 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms