RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 LATS1O95835 1130 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 FAM228BP0C875 321 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 MAGEA9P43362 315 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 SLC11A2P49281 568 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 ADKP55263 362 aaKnown RBP12.88□□□□□ -0.35
APTX-220ENST00000476858 ZBED6P86452 979 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 DEUP1Q05D60 604 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 DMC1Q14565 340 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 MPPE1Q53F39 396 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 DAB2IPQ5VWQ8 1189 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 KIAA1211LQ6NV74 962 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 FBXL22Q6P050 247 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 ADIPOR2Q86V24 386 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 CPNE8Q86YQ8 564 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 SYNPOQ8N3V7 929 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 ARFGAP1Q8N6T3 406 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 CCDC185Q8N715 623 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 CYB5D2Q8WUJ1 264 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 RNF34Q969K3 372 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 AZIN2Q96A70 460 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 MCEEQ96PE7 176 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 XPO6Q96QU8 1125 aaKnown RBP12.88□□□□□ -0.35
APTX-220ENST00000476858 TKTL2Q9H0I9 626 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 SIK2Q9H0K1 926 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 KCNH6Q9H252 994 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 MTG2Q9H4K7 406 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 CD248Q9HCU0 757 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 CD93Q9NPY3 652 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.88□□□□□ -0.35
APTX-220ENST00000476858 ARHGEF38Q9NXL2 777 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 FBXO4Q9UKT5 387 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 NENFQ9UMX5 172 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 INVSQ9Y283 1065 aa12.88□□□□□ -0.35
APTX-220ENST00000476858 EML5Q05BV3 1969 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.87□□□□□ -0.35
APTX-220ENST00000476858 FAM72CH0Y354 149 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 CCP110O43303 1012 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 HRO43593 1189 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 ENDOD1O94919 500 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 APOEP02649 317 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 FTLP02792 175 aaPredicted RBP12.87□□□□□ -0.35
APTX-220ENST00000476858 KRT3P12035 628 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 PDGFRAP16234 1089 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 CCR1P32246 355 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 PLA2G5P39877 138 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 NBL1P41271 181 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 CTSOP43234 321 aaPredicted RBP12.87□□□□□ -0.35
APTX-220ENST00000476858 TNFRSF4P43489 277 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 CCR3P51677 355 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 HDAC4P56524 1084 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 GSCP56915 257 aaPredicted RBP12.87□□□□□ -0.35
APTX-220ENST00000476858 LMAN2Q12907 356 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 TBX2Q13207 712 aaPredicted RBP12.87□□□□□ -0.35
APTX-220ENST00000476858 AUHQ13825 339 aaKnown RBP12.87□□□□□ -0.35
APTX-220ENST00000476858 PPP2R5DQ14738 602 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 FUT11Q495W5 492 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 ALFQ53S48 1182 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 TDRD12Q587J7 1177 aaKnown RBP12.87□□□□□ -0.35
APTX-220ENST00000476858 FAM72AQ5TYM5 149 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 SPECC1LQ69YQ0 1117 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 FAM72DQ6L9T8 149 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 ASCL5Q7RTU5 278 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 KIAA0907Q7Z7F0 614 aaPredicted RBP12.87□□□□□ -0.35
APTX-220ENST00000476858 FAM72BQ86X60 149 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 APCDD1Q8J025 514 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 CARNMT1Q8N4J0 409 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 FRMD1Q8N878 549 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 ZNF366Q8N895 744 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 ZNF513Q8N8E2 541 aaPredicted RBP12.87□□□□□ -0.35
APTX-220ENST00000476858 ZBTB44Q8NCP5 570 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 C3orf20Q8ND61 904 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 ARHGEF26Q96DR7 871 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 PGAP3Q96FM1 320 aaPredicted RBP12.87□□□□□ -0.35
APTX-220ENST00000476858 BTN2A3PQ96KV6 586 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 CHP1Q99653 195 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 TRIM62Q9BVG3 475 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 NUP58Q9BVL2 599 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 ADAMTS1Q9UHI8 967 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 VANGL2Q9ULK5 521 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 MMP17Q9ULZ9 603 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 SLC27A6Q9Y2P4 619 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 LUC7L2Q9Y383 392 aaKnown RBP12.87□□□□□ -0.35
APTX-220ENST00000476858 FRYLO94915 3013 aa12.87□□□□□ -0.35
APTX-220ENST00000476858 FANCMQ8IYD8 2048 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 A0A1W2PQF6 199 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 SIGLEC16A6NMB1 481 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 DCLK1O15075 740 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 PAPSS2O95340 614 aaPredicted RBP12.86□□□□□ -0.35
APTX-220ENST00000476858 CYBBP04839 570 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 CALB1P05937 261 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 HLA-EP13747 358 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 PRKCHP24723 683 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 MZF1P28698 734 aaPredicted RBP12.86□□□□□ -0.35
APTX-220ENST00000476858 GBP1P32455 592 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 EIF4A3P38919 411 aaKnown RBP12.86□□□□□ -0.35
APTX-220ENST00000476858 IL12RB1P42701 662 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 SNX16P57768 344 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 MAMLD1Q13495 774 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 LPAL2Q16609 132 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 PTPRNQ16849 979 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms