RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 WDFY4Q6ZS81 3184 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 TRIM64CA6NLI5 447 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 A8MXE2 369 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 M0QYG6 137 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 TAF4O00268 1085 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 PIAS2O75928 621 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 ALDH1A2O94788 518 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 DBHP09172 617 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 P4HA1P13674 534 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 KRT2P35908 639 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 PPARGP37231 505 aaPredicted RBP7.3□□□□□ -1.24
LRCH3-215ENST00000476664 ALDH1A3P47895 512 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 NKX3-2P78367 333 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 MRPS35P82673 323 aaKnown RBP7.3□□□□□ -1.24
LRCH3-215ENST00000476664 SATB1Q01826 763 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 MYO1EQ12965 1108 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 AIMP2Q13155 320 aaKnown RBP7.3□□□□□ -1.24
LRCH3-215ENST00000476664 PDCLQ13371 301 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 CSHL1Q14406 222 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 KCNAB1Q14722 419 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 CRYMQ14894 314 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 TBRG1Q3YBR2 411 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 PLA1AQ53H76 456 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 ZNF484Q5JVG2 852 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 PAQR3Q6TCH7 311 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 LINC00114Q6XXX2 140 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 SCN4BQ8IWT1 228 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 FBXL6Q8N531 539 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 DNERQ8NFT8 737 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 FBXO18Q8NFZ0 1043 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 GSDMBQ8TAX9 411 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 NETO1Q8TDF5 533 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 ABHD5Q8WTS1 349 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 NOC3LQ8WTT2 800 aaKnown RBP7.3□□□□□ -1.24
LRCH3-215ENST00000476664 NKD2Q969F2 451 aaPredicted RBP7.3□□□□□ -1.24
LRCH3-215ENST00000476664 RBM17Q96I25 401 aaKnown RBP7.3□□□□□ -1.24
LRCH3-215ENST00000476664 GBP5Q96PP8 586 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 NUDT22Q9BRQ3 303 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 INTS2Q9H0H0 1204 aaKnown RBP7.3□□□□□ -1.24
LRCH3-215ENST00000476664 RXFP1Q9HBX9 757 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 ANAPC5Q9UJX4 755 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 CORO1CQ9ULV4 474 aaPredicted RBP7.3□□□□□ -1.24
LRCH3-215ENST00000476664 CCL27Q9Y4X3 112 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 CACNA1BQ00975 2339 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 ALPK3Q96L96 1907 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 NPC1L1Q9UHC9 1359 aa7.3□□□□□ -1.24
LRCH3-215ENST00000476664 EVC2Q86UK5 1308 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 ZC3H12DA2A288 527 aaKnown RBP7.29□□□□□ -1.24
LRCH3-215ENST00000476664 NPIPB15A6NHN6 443 aaPredicted RBP7.29□□□□□ -1.24
LRCH3-215ENST00000476664 F8W031 263 aaPredicted RBP7.29□□□□□ -1.24
LRCH3-215ENST00000476664 ZSCAN9O15535 394 aaPredicted RBP7.29□□□□□ -1.24
LRCH3-215ENST00000476664 RRP9O43818 475 aaKnown RBP7.29□□□□□ -1.24
LRCH3-215ENST00000476664 TUBB4AP04350 444 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 SPATA31C1P0DKV0 1188 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 RAP2AP10114 183 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 SAT1P21673 171 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 ZNF135P52742 658 aaPredicted RBP7.29□□□□□ -1.24
LRCH3-215ENST00000476664 TPD52P55327 224 aaPredicted RBP7.29□□□□□ -1.24
LRCH3-215ENST00000476664 CXCL9Q07325 125 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 SF3A3Q12874 501 aaKnown RBP eCLIP7.29□□□□□ -1.24
LRCH3-215ENST00000476664 ZNF750Q32MQ0 723 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 PARP10Q53GL7 1025 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 FAM160B1Q5W0V3 765 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 TMEM200BQ69YZ2 307 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 OTUD7BQ6GQQ9 843 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 ALKBH5Q6P6C2 394 aaKnown RBP7.29□□□□□ -1.24
LRCH3-215ENST00000476664 TMEM154Q6P9G4 183 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 DCLRE1AQ6PJP8 1040 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 TMC5Q6UXY8 1006 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 LIPIQ6XZB0 460 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 SEM1Q6ZVN7 128 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 OTOP2Q7RTS6 562 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 TDHQ8IZJ6 230 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 WDTC1Q8N5D0 677 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 LILRA3Q8N6C8 439 aaPredicted RBP7.29□□□□□ -1.24
LRCH3-215ENST00000476664 CNBD1Q8NA66 436 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 MOSPD2Q8NHP6 518 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 DEPDC1BQ8WUY9 529 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 SCAMP4Q969E2 229 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 SAAL1Q96ER3 474 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 TSPAN17Q96FV3 270 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 NR1H4Q96RI1 486 aaPredicted RBP7.29□□□□□ -1.24
LRCH3-215ENST00000476664 IWS1Q96ST2 819 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 CDX2Q99626 313 aaPredicted RBP7.29□□□□□ -1.24
LRCH3-215ENST00000476664 APOL6Q9BWW8 343 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 PHF7Q9BWX1 381 aaPredicted RBP7.29□□□□□ -1.24
LRCH3-215ENST00000476664 TEX12Q9BXU0 123 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 TRIM5Q9C035 493 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 NDST4Q9H3R1 872 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 IL21RQ9HBE5 538 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 HDAC5Q9UQL6 1122 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 ATP11BQ9Y2G3 1177 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 TBC1D30Q9Y2I9 924 aa7.29□□□□□ -1.24
LRCH3-215ENST00000476664 ZNF646O15015 1829 aaPredicted RBP7.29□□□□□ -1.24
LRCH3-215ENST00000476664 C5orf42Q9H799 3197 aa7.28□□□□□ -1.24
LRCH3-215ENST00000476664 A0A0G2JNJ9 132 aa7.28□□□□□ -1.24
LRCH3-215ENST00000476664 A0A1W2PQ09 198 aa7.28□□□□□ -1.24
LRCH3-215ENST00000476664 GAGE10A6NGK3 116 aa7.28□□□□□ -1.24
LRCH3-215ENST00000476664 MYO1GB0I1T2 1018 aa7.28□□□□□ -1.24
LRCH3-215ENST00000476664 ERVV-2B6SEH9 535 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms