RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 KAT5Q92993 513 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 AZIN2Q96A70 460 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 MYEOVQ96EZ4 313 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 TSG101Q99816 390 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 FBRSQ9HAH7 460 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 DSPP15924 2871 aaKnown RBP13.65□□□□□ -0.22
MRPL55-228ENST00000476267 GOLGA6L7A0A1B0GV03 622 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 A0A1B0GVT2 93 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 CALCAP01258 141 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 LTFP02788 710 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 CD44P16070 742 aaKnown RBP13.64□□□□□ -0.23
MRPL55-228ENST00000476267 CSNK1EP49674 416 aaKnown RBP13.64□□□□□ -0.23
MRPL55-228ENST00000476267 RGS7P49802 495 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 AFF3P51826 1226 aaKnown RBP13.64□□□□□ -0.23
MRPL55-228ENST00000476267 ZBTB16Q05516 673 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 LRMPQ12912 555 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 CNGA2Q16280 664 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 FNDC3BQ53EP0 1204 aaKnown RBP13.64□□□□□ -0.23
MRPL55-228ENST00000476267 NUGGCQ68CJ6 796 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 RFWD3Q6PCD5 774 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 TMEM270Q6UE05 265 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 TTC17Q96AE7 1141 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 BIRC7Q96CA5 298 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 FCRL2Q96LA5 508 aaPredicted RBP13.64□□□□□ -0.23
MRPL55-228ENST00000476267 MRGPRX3Q96LB0 322 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 TM9SF3Q9HD45 589 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 INTS6Q9UL03 887 aaKnown RBP13.64□□□□□ -0.23
MRPL55-228ENST00000476267 PLA2G4CQ9UP65 541 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 PCDHB9Q9Y5E1 797 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 CELSR3Q9NYQ7 3312 aa13.64□□□□□ -0.23
MRPL55-228ENST00000476267 COL5A1P20908 1838 aaPredicted RBP13.64□□□□□ -0.23
MRPL55-228ENST00000476267 M0QYV0 167 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 PIK3R2O00459 728 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 FLRT2O43155 660 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 IRAK2O43187 625 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 ACSL4O60488 711 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 TBL1XO60907 577 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 SEMA4FO95754 770 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 GRIA4P48058 902 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 ARID5AQ03989 594 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 SCAPQ12770 1279 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 ARID5BQ14865 1188 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 STILQ15468 1287 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 KIF19Q2TAC6 998 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 UNC45BQ8IWX7 931 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 FIBINQ8TAL6 211 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 SLC39A13Q96H72 371 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 CCDC34Q96HJ3 373 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 HSFY1Q96LI6 401 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 TIGD1Q96MW7 591 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 RSPH9Q9H1X1 276 aaPredicted RBP13.63□□□□□ -0.23
MRPL55-228ENST00000476267 MTG2Q9H4K7 406 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 METTL14Q9HCE5 456 aaKnown RBP13.63□□□□□ -0.23
MRPL55-228ENST00000476267 CNTN6Q9UQ52 1028 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 APOBEC2Q9Y235 224 aaKnown RBP13.63□□□□□ -0.23
MRPL55-228ENST00000476267 BTBD3Q9Y2F9 522 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 SNX11Q9Y5W9 270 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 PKD1L2Q7Z442 2459 aa13.63□□□□□ -0.23
MRPL55-228ENST00000476267 ADAMTS20P59510 1910 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 IGHV4-34P06331 123 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 ATP5BP06576 529 aaKnown RBP13.62□□□□□ -0.23
MRPL55-228ENST00000476267 BMP6P22004 513 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 BRD2P25440 801 aaKnown RBP13.62□□□□□ -0.23
MRPL55-228ENST00000476267 GCNT1Q02742 428 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 NNTQ13423 1086 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 KCNT1Q5JUK3 1230 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 TTI2Q6NXR4 508 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 FOXR2Q6PJQ5 311 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 LRSAM1Q6UWE0 723 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 ARHGEF19Q8IW93 802 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 DQX1Q8TE96 717 aaKnown RBP13.62□□□□□ -0.23
MRPL55-228ENST00000476267 SMARCE1Q969G3 411 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 DHTKD1Q96HY7 919 aaPredicted RBP13.62□□□□□ -0.23
MRPL55-228ENST00000476267 CEP63Q96MT8 703 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 NT5C1BQ96P26 610 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 GTPBP4Q9BZE4 634 aaKnown RBP13.62□□□□□ -0.23
MRPL55-228ENST00000476267 BTBD1Q9H0C5 482 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 SERGEFQ9UGK8 458 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 GPSM3Q9Y4H4 160 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 PCDHB4Q9Y5E5 795 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 ITIH6Q6UXX5 1313 aa13.62□□□□□ -0.23
MRPL55-228ENST00000476267 NUMA1Q14980 2115 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 P4HA2O15460 535 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 PAPSS1O43252 624 aaPredicted RBP13.61□□□□□ -0.23
MRPL55-228ENST00000476267 FBXO21O94952 628 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 SMC2O95347 1197 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 DNTTP04053 509 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 ATXN1LP0C7T5 689 aaKnown RBP13.61□□□□□ -0.23
MRPL55-228ENST00000476267 POLR2EP19388 210 aaKnown RBP13.61□□□□□ -0.23
MRPL55-228ENST00000476267 CD27P26842 260 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 CTSKP43235 329 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 GPD2P43304 727 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 SLC11A2P49281 568 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 TBX4P57082 545 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 RPS24P62847 133 aaKnown RBP13.61□□□□□ -0.23
MRPL55-228ENST00000476267 EIF4EBP2Q13542 120 aaPredicted RBP13.61□□□□□ -0.23
MRPL55-228ENST00000476267 HNRNPA1L2Q32P51 320 aaKnown RBP13.61□□□□□ -0.23
MRPL55-228ENST00000476267 FSCBQ5H9T9 825 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 MS4A13Q5J8X5 152 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 ZNF776Q68DI1 518 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms