RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 KLHL40Q2TBA0 621 aa21.93■■□□□ 1.1
LIME1-204ENST00000476183 CHST9Q7L1S5 443 aa21.93■■□□□ 1.1
LIME1-204ENST00000476183 ZNF677Q86XU0 584 aa21.93■■□□□ 1.1
LIME1-204ENST00000476183 LGI2Q8N0V4 545 aa21.93■■□□□ 1.1
LIME1-204ENST00000476183 CFAP52Q8N1V2 620 aa21.93■■□□□ 1.1
LIME1-204ENST00000476183 WFIKKN2Q8TEU8 576 aa21.93■■□□□ 1.1
LIME1-204ENST00000476183 SPAG5Q96R06 1193 aa21.93■■□□□ 1.1
LIME1-204ENST00000476183 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.93■■□□□ 1.1
LIME1-204ENST00000476183 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.93■■□□□ 1.1
LIME1-204ENST00000476183 MUC22E2RYF6 1773 aaPredicted RBP21.92■■□□□ 1.1
LIME1-204ENST00000476183 NPC1O15118 1278 aa21.92■■□□□ 1.1
LIME1-204ENST00000476183 TIMM44O43615 452 aa21.92■■□□□ 1.1
LIME1-204ENST00000476183 RHOBTB1O94844 696 aa21.92■■□□□ 1.1
LIME1-204ENST00000476183 PRKCHP24723 683 aa21.92■■□□□ 1.1
LIME1-204ENST00000476183 MATKP42679 507 aa21.92■■□□□ 1.1
LIME1-204ENST00000476183 ZNF165P49910 485 aa21.92■■□□□ 1.1
LIME1-204ENST00000476183 RNASE9P60153 205 aaKnown RBP21.92■■□□□ 1.1
LIME1-204ENST00000476183 C11orf74Q86VG3 221 aa21.92■■□□□ 1.1
LIME1-204ENST00000476183 CHSY1Q86X52 802 aa21.92■■□□□ 1.1
LIME1-204ENST00000476183 MFN1Q8IWA4 741 aa21.92■■□□□ 1.1
LIME1-204ENST00000476183 ATP6V0D2Q8N8Y2 350 aa21.92■■□□□ 1.1
LIME1-204ENST00000476183 FIBINQ8TAL6 211 aa21.92■■□□□ 1.1
LIME1-204ENST00000476183 CYB5D2Q8WUJ1 264 aa21.92■■□□□ 1.1
LIME1-204ENST00000476183 PRMT1Q99873 361 aaKnown RBP21.92■■□□□ 1.1
LIME1-204ENST00000476183 LAMA1P25391 3075 aa21.92■■□□□ 1.1
LIME1-204ENST00000476183 NUP205Q92621 2012 aa21.92■■□□□ 1.1
LIME1-204ENST00000476183 SYCE3A1L190 88 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 SMTNL1A8MU46 457 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 CYP1A1P04798 512 aaPredicted RBP21.91■■□□□ 1.1
LIME1-204ENST00000476183 CCR1P32246 355 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 SCNN1AP37088 669 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 ID4P47928 161 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 LMAN2Q12907 356 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 NME3Q13232 169 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 IQCB1Q15051 598 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 PTPRNQ16849 979 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 FUT11Q495W5 492 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 FSCBQ5H9T9 825 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 PLA2G2CQ5R387 149 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 FAM102AQ5T9C2 384 aaPredicted RBP21.91■■□□□ 1.1
LIME1-204ENST00000476183 MBLAC2Q68D91 279 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 TRNP1Q6NT89 227 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 PRR23CQ6ZRP0 262 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 AHI1Q8N157 1196 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 CARNMT1Q8N4J0 409 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 MRGPRX1Q96LB2 322 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 PCDHB18PQ96TA0 734 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 NPY6RQ99463 290 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 SMOC1Q9H4F8 434 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 CD93Q9NPY3 652 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 RTN4Q9NQC3 1192 aaKnown RBP21.91■■□□□ 1.1
LIME1-204ENST00000476183 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.91■■□□□ 1.1
LIME1-204ENST00000476183 INTS6Q9UL03 887 aaKnown RBP21.91■■□□□ 1.1
LIME1-204ENST00000476183 PCDHGA5Q9Y5G8 931 aa21.91■■□□□ 1.1
LIME1-204ENST00000476183 GOLGA8SH3BPF8 625 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 M0QYT0 321 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 SLC2A3P11169 496 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 HLA-EP13747 358 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 FLT3P36888 993 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 MPLP40238 635 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 LMNB2Q03252 620 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 STARD3Q14849 445 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 RSPO4Q2I0M5 234 aaPredicted RBP21.9■■□□□ 1.1
LIME1-204ENST00000476183 MMS22LQ6ZRQ5 1243 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 RNF34Q969K3 372 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 NT5C3BQ969T7 300 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 SPACA7Q96KW9 195 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 MKRN2Q9H000 416 aaKnown RBP21.9■■□□□ 1.1
LIME1-204ENST00000476183 PIGVQ9NUD9 493 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 SLC12A6Q9UHW9 1150 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 TMEM59LQ9UK28 342 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 CACNA1AO00555 2505 aa21.9■■□□□ 1.1
LIME1-204ENST00000476183 TYW5A2RUC4 315 aaKnown RBP21.89■■□□□ 1.09
LIME1-204ENST00000476183 F5H5T6 163 aa21.89■■□□□ 1.09
LIME1-204ENST00000476183 LUC7L3O95232 432 aaKnown RBP21.89■■□□□ 1.09
LIME1-204ENST00000476183 ABCB4P21439 1286 aa21.89■■□□□ 1.09
LIME1-204ENST00000476183 CREB5Q02930 508 aa21.89■■□□□ 1.09
LIME1-204ENST00000476183 ARID5AQ03989 594 aa21.89■■□□□ 1.09
LIME1-204ENST00000476183 SF3A2Q15428 464 aaKnown RBP21.89■■□□□ 1.09
LIME1-204ENST00000476183 SERPINA13PQ6UXR4 307 aa21.89■■□□□ 1.09
LIME1-204ENST00000476183 CIR1Q86X95 450 aaPredicted RBP21.89■■□□□ 1.09
LIME1-204ENST00000476183 SLC30A5Q8TAD4 765 aa21.89■■□□□ 1.09
LIME1-204ENST00000476183 TBCBQ99426 244 aa21.89■■□□□ 1.09
LIME1-204ENST00000476183 TMEM245Q9H330 911 aa21.89■■□□□ 1.09
LIME1-204ENST00000476183 ANLNQ9NQW6 1124 aa21.89■■□□□ 1.09
LIME1-204ENST00000476183 RRN3Q9NYV6 651 aa21.89■■□□□ 1.09
LIME1-204ENST00000476183 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.88■■□□□ 1.09
LIME1-204ENST00000476183 IGHV1OR15-9A0A0B4J2B8 117 aa21.88■■□□□ 1.09
LIME1-204ENST00000476183 BCLAF3A2AJT9 711 aaKnown RBP21.88■■□□□ 1.09
LIME1-204ENST00000476183 I6L893 689 aaPredicted RBP21.88■■□□□ 1.09
LIME1-204ENST00000476183 ZBTB24O43167 697 aaPredicted RBP21.88■■□□□ 1.09
LIME1-204ENST00000476183 EPHX1P07099 455 aa21.88■■□□□ 1.09
LIME1-204ENST00000476183 DLDP09622 509 aaKnown RBP21.88■■□□□ 1.09
LIME1-204ENST00000476183 ZNF806P0C7X5 589 aa21.88■■□□□ 1.09
LIME1-204ENST00000476183 UNGP13051 313 aaPredicted RBP21.88■■□□□ 1.09
LIME1-204ENST00000476183 MMP8P22894 467 aa21.88■■□□□ 1.09
LIME1-204ENST00000476183 GGCXP38435 758 aa21.88■■□□□ 1.09
LIME1-204ENST00000476183 SULT1E1P49888 294 aa21.88■■□□□ 1.09
LIME1-204ENST00000476183 CDH18Q13634 790 aa21.88■■□□□ 1.09
LIME1-204ENST00000476183 BYSLQ13895 437 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms