RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 PYDC1Q8WXC3 89 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 MTIF3Q9H2K0 278 aaKnown RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 C12orf65Q9H3J6 166 aaKnown RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 HOXC10Q9NYD6 342 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 KIAA1522Q9P206 1035 aaPredicted RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 ADAMTS6Q9UKP5 1117 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 EIF3LQ9Y262 564 aaKnown RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 TMED5Q9Y3A6 229 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 COL1A1P02452 1464 aaPredicted RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 MEI4A8MW99 385 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 CYP19A1P11511 503 aaPredicted RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 FEN1P39748 380 aaKnown RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 HIRAP54198 1017 aaPredicted RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 OTUD4Q01804 1114 aaKnown RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 RHAGQ02094 409 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 KLHL12Q53G59 568 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 CACHD1Q5VU97 1274 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 C11orf74Q86VG3 221 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 ARID3BQ8IVW6 561 aaPredicted RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 GPD1LQ8N335 351 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 ATPAF2Q8N5M1 289 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 CPVLQ9H3G5 476 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 GPAMQ9HCL2 828 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 PCDHGB5Q9Y5G0 923 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 PRR23AA6NEV1 266 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 FCHO1O14526 889 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 H2AFYO75367 372 aaKnown RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 JAK1P23458 1154 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 PTK7Q13308 1070 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 LPIN1Q14693 890 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 ADGRG6Q86SQ4 1221 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 HS6ST3Q8IZP7 471 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 GPR63Q9BZJ6 419 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 KLHL4Q9C0H6 718 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 ILKAPQ9H0C8 392 aaPredicted RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 HDHD2Q9H0R4 259 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 DMTF1Q9Y222 760 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 TBX22Q9Y458 520 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 HEMK1Q9Y5R4 338 aaPredicted RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 CICQ96RK0 1608 aaPredicted RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 TNFRSF21O75509 655 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 DLDP09622 509 aaKnown RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 KCNA6P17658 529 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 CASP4P49662 377 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 PPIDQ08752 370 aaKnown RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 TWF1Q12792 350 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 PDZK1Q5T2W1 519 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 PAOXQ6QHF9 649 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 PRPF39Q86UA1 669 aaKnown RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 CYP4Z1Q86W10 505 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 SLC44A2Q8IWA5 706 aaPredicted RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 MKNK1Q9BUB5 465 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 IL17RBQ9NRM6 502 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 ARIH1Q9Y4X5 557 aaPredicted RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 STX7O15400 261 aaKnown RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 TRMUO75648 421 aaKnown RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 TDP2O95551 362 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 MZF1P28698 734 aaPredicted RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 C3orf62Q6ZUJ4 267 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 CAMKK2Q96RR4 588 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 S100A14Q9HCY8 104 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 KLHL28Q9NXS3 571 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 DCCP43146 1447 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 ADGRA2Q96PE1 1338 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 ASNA1O43681 348 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 EDIL3O43854 480 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 DGKIO75912 1065 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 YWHAQP27348 245 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 RFX3P48380 749 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 CACNB2Q08289 660 aaPredicted RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 COX10Q12887 443 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 ORC2Q13416 577 aaPredicted RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 DDX39BQ13838 428 aaKnown RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 SDE2Q6IQ49 451 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 ALYREFQ86V81 257 aaKnown RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 ALDH16A1Q8IZ83 802 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 KIF12Q96FN5 646 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 TMEM260Q9NX78 707 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 COPG2Q9UBF2 871 aa11.78□□□□□ -0.52
U2AF1-209ENST00000475639 AGO2Q9UKV8 859 aaKnown RBP11.78□□□□□ -0.52
U2AF1-209ENST00000475639 SF3B1O75533 1304 aaKnown RBP eCLIP11.78□□□□□ -0.526e-6■■■■■ 103.4
U2AF1-209ENST00000475639 VWA5AO00534 786 aa11.77□□□□□ -0.52
U2AF1-209ENST00000475639 RGS20O76081 388 aa11.77□□□□□ -0.52
U2AF1-209ENST00000475639 PDE9AO76083 593 aa11.77□□□□□ -0.52
U2AF1-209ENST00000475639 RBP3P10745 1247 aa11.77□□□□□ -0.52
U2AF1-209ENST00000475639 THRAP10827 490 aa11.77□□□□□ -0.52
U2AF1-209ENST00000475639 HOXD13P35453 343 aa11.77□□□□□ -0.52
U2AF1-209ENST00000475639 EFNA5P52803 228 aa11.77□□□□□ -0.52
U2AF1-209ENST00000475639 LGALS3BPQ08380 585 aa11.77□□□□□ -0.52
U2AF1-209ENST00000475639 PUDPQ08623 228 aa11.77□□□□□ -0.52
U2AF1-209ENST00000475639 RASA2Q15283 850 aa11.77□□□□□ -0.52
U2AF1-209ENST00000475639 PEG10Q86TG7 708 aaKnown RBP11.77□□□□□ -0.52
U2AF1-209ENST00000475639 RELL1Q8IUW5 271 aa11.77□□□□□ -0.52
U2AF1-209ENST00000475639 CDK20Q8IZL9 346 aa11.77□□□□□ -0.52
U2AF1-209ENST00000475639 GSTCDQ8NEC7 633 aa11.77□□□□□ -0.52
U2AF1-209ENST00000475639 OXNAD1Q96HP4 312 aaPredicted RBP11.77□□□□□ -0.52
U2AF1-209ENST00000475639 FAR2Q96K12 515 aa11.77□□□□□ -0.52
U2AF1-209ENST00000475639 HNRNPABQ99729 332 aaKnown RBP11.77□□□□□ -0.52
U2AF1-209ENST00000475639 SLAIN2Q9P270 581 aa11.77□□□□□ -0.52
U2AF1-209ENST00000475639 ZBTB39O15060 712 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms