RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 EPHA10Q5JZY3 1008 aa7.22□□□□□ -1.25
SMC5-203ENST00000475540 FAM47BQ8NA70 645 aa7.22□□□□□ -1.25
SMC5-203ENST00000475540 EID2BQ96D98 161 aa7.22□□□□□ -1.25
SMC5-203ENST00000475540 ZFYVE19Q96K21 471 aa7.22□□□□□ -1.25
SMC5-203ENST00000475540 CRB3Q9BUF7 120 aa7.22□□□□□ -1.25
SMC5-203ENST00000475540 RAB21Q9UL25 225 aa7.22□□□□□ -1.25
SMC5-203ENST00000475540 HS3ST3B1Q9Y662 390 aa7.22□□□□□ -1.25
SMC5-203ENST00000475540 TBC1D3DA0A087WVF3 549 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 TBC1D3IA0A087WXS9 549 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 TBC1D3EA0A087X179 549 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 TBC1D3KA0A087X1G2 549 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 TBC1D3BA6NDS4 549 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 TBC1D3FA6NER0 549 aaPredicted RBP7.21□□□□□ -1.26
SMC5-203ENST00000475540 TBC1D3LB9A6J9 549 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 F8W810 466 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 PRPF4O43172 522 aaKnown RBP eCLIP7.21□□□□□ -1.26
SMC5-203ENST00000475540 PPP6R2O75170 966 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 KAT7O95251 611 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 ALDOAP04075 364 aaKnown RBP7.21□□□□□ -1.26
SMC5-203ENST00000475540 IGKV2-30P06310 120 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 ITGA2BP08514 1039 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 TBC1D3HP0C7X1 549 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 ME1P48163 572 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 RPL15P61313 204 aaKnown RBP7.21□□□□□ -1.26
SMC5-203ENST00000475540 RBM6P78332 1123 aaKnown RBP7.21□□□□□ -1.26
SMC5-203ENST00000475540 MORC3Q14149 939 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 TBC1D3GQ6DHY5 549 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 TBC1D3CQ6IPX1 549 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 TMEM88Q6PEY1 159 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 TBC1D3Q8IZP1 549 aaPredicted RBP7.21□□□□□ -1.26
SMC5-203ENST00000475540 HMGB4Q8WW32 186 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 KATNAL1Q9BW62 490 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 PAPOLBQ9NRJ5 636 aaKnown RBP7.21□□□□□ -1.26
SMC5-203ENST00000475540 HEY2Q9UBP5 337 aa7.21□□□□□ -1.26
SMC5-203ENST00000475540 HERC5Q9UII4 1024 aaKnown RBP7.21□□□□□ -1.26
SMC5-203ENST00000475540 TRPC5Q9UL62 973 aaPredicted RBP7.21□□□□□ -1.26
SMC5-203ENST00000475540 EFCAB8A8MWE9 144 aa7.2□□□□□ -1.26
SMC5-203ENST00000475540 F5H423 210 aaPredicted RBP7.2□□□□□ -1.26
SMC5-203ENST00000475540 UGDHO60701 494 aa7.2□□□□□ -1.26
SMC5-203ENST00000475540 CNTN5O94779 1100 aa7.2□□□□□ -1.26
SMC5-203ENST00000475540 CYP3A4P08684 503 aa7.2□□□□□ -1.26
SMC5-203ENST00000475540 TGM2P21980 687 aa7.2□□□□□ -1.26
SMC5-203ENST00000475540 SF3A3Q12874 501 aaKnown RBP eCLIP7.2□□□□□ -1.26
SMC5-203ENST00000475540 MTX1Q13505 466 aa7.2□□□□□ -1.26
SMC5-203ENST00000475540 TWIST1Q15672 202 aa7.2□□□□□ -1.26
SMC5-203ENST00000475540 LRCH2Q5VUJ6 765 aa7.2□□□□□ -1.26
SMC5-203ENST00000475540 ZNF474Q6S9Z5 364 aaPredicted RBP7.2□□□□□ -1.26
SMC5-203ENST00000475540 ARL14EPQ8N8R7 260 aaPredicted RBP7.2□□□□□ -1.26
SMC5-203ENST00000475540 NRACQ8N912 160 aa7.2□□□□□ -1.26
SMC5-203ENST00000475540 ATG16L2Q8NAA4 619 aa7.2□□□□□ -1.26
SMC5-203ENST00000475540 WIPF2Q8TF74 440 aaPredicted RBP7.2□□□□□ -1.26
SMC5-203ENST00000475540 IGFBPL1Q8WX77 278 aa7.2□□□□□ -1.26
SMC5-203ENST00000475540 BRD8Q9H0E9 1235 aa7.2□□□□□ -1.26
SMC5-203ENST00000475540 FOXP1Q9H334 677 aaPredicted RBP7.2□□□□□ -1.26
SMC5-203ENST00000475540 CNTN6Q9UQ52 1028 aa7.2□□□□□ -1.26
SMC5-203ENST00000475540 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.2□□□□□ -1.26
SMC5-203ENST00000475540 GYS1P13807 737 aa7.19□□□□□ -1.26
SMC5-203ENST00000475540 PDIA3P30101 505 aaKnown RBP7.19□□□□□ -1.26
SMC5-203ENST00000475540 TAS2R50P59544 299 aa7.19□□□□□ -1.26
SMC5-203ENST00000475540 B4GALNT1Q00973 533 aa7.19□□□□□ -1.26
SMC5-203ENST00000475540 RNASELQ05823 741 aaKnown RBP7.19□□□□□ -1.26
SMC5-203ENST00000475540 OS9Q13438 667 aaPredicted RBP7.19□□□□□ -1.26
SMC5-203ENST00000475540 BTBD16Q32M84 506 aa7.19□□□□□ -1.26
SMC5-203ENST00000475540 TRIM60Q495X7 471 aa7.19□□□□□ -1.26
SMC5-203ENST00000475540 CCDC117Q8IWD4 279 aaPredicted RBP7.19□□□□□ -1.26
SMC5-203ENST00000475540 ARFGAP1Q8N6T3 406 aa7.19□□□□□ -1.26
SMC5-203ENST00000475540 MPLKIPQ8TAP9 179 aa7.19□□□□□ -1.26
SMC5-203ENST00000475540 ZFPM2Q8WW38 1151 aa7.19□□□□□ -1.26
SMC5-203ENST00000475540 SLC39A13Q96H72 371 aa7.19□□□□□ -1.26
SMC5-203ENST00000475540 RTKNQ9BST9 563 aa7.19□□□□□ -1.26
SMC5-203ENST00000475540 MECRQ9BV79 373 aa7.19□□□□□ -1.26
SMC5-203ENST00000475540 LIN7CQ9NUP9 197 aaKnown RBP7.19□□□□□ -1.26
SMC5-203ENST00000475540 POT1Q9NUX5 634 aa7.19□□□□□ -1.26
SMC5-203ENST00000475540 LRFN1Q9P244 771 aa7.19□□□□□ -1.26
SMC5-203ENST00000475540 SLC8A2Q9UPR5 921 aa7.19□□□□□ -1.26
SMC5-203ENST00000475540 ZNF335Q9H4Z2 1342 aaPredicted RBP7.19□□□□□ -1.26
SMC5-203ENST00000475540 LY6G6EA0A0G2JKS1 128 aa7.18□□□□□ -1.26
SMC5-203ENST00000475540 DPPA5A6NC42 116 aa7.18□□□□□ -1.26
SMC5-203ENST00000475540 SYT5O00445 386 aa7.18□□□□□ -1.26
SMC5-203ENST00000475540 PEPDP12955 493 aa7.18□□□□□ -1.26
SMC5-203ENST00000475540 SERPINF1P36955 418 aa7.18□□□□□ -1.26
SMC5-203ENST00000475540 FOXL2P58012 376 aa7.18□□□□□ -1.26
SMC5-203ENST00000475540 SHC2P98077 582 aa7.18□□□□□ -1.26
SMC5-203ENST00000475540 SRSF1Q07955 248 aaKnown RBP eCLIP7.18□□□□□ -1.26
SMC5-203ENST00000475540 CHAF1AQ13111 956 aaPredicted RBP7.18□□□□□ -1.26
SMC5-203ENST00000475540 KLHL17Q6TDP4 642 aa7.18□□□□□ -1.26
SMC5-203ENST00000475540 PIP4P1Q86T03 277 aa7.18□□□□□ -1.26
SMC5-203ENST00000475540 SPICE1Q8N0Z3 855 aa7.18□□□□□ -1.26
SMC5-203ENST00000475540 SLC44A5Q8NCS7 719 aa7.18□□□□□ -1.26
SMC5-203ENST00000475540 VPS37AQ8NEZ2 397 aa7.18□□□□□ -1.26
SMC5-203ENST00000475540 ZNF347Q96SE7 839 aa7.18□□□□□ -1.26
SMC5-203ENST00000475540 HTATIP2Q9BUP3 242 aa7.18□□□□□ -1.26
SMC5-203ENST00000475540 TAGLN3Q9UI15 199 aa7.18□□□□□ -1.26
SMC5-203ENST00000475540 LMTK3Q96Q04 1460 aa7.17□□□□□ -1.26
SMC5-203ENST00000475540 CYP3A7-CYP3A51PA0A087WV96 503 aa7.17□□□□□ -1.26
SMC5-203ENST00000475540 ALDOCP09972 364 aaKnown RBP7.17□□□□□ -1.26
SMC5-203ENST00000475540 IGFBP2P18065 325 aa7.17□□□□□ -1.26
SMC5-203ENST00000475540 CYP3A7P24462 503 aa7.17□□□□□ -1.26
SMC5-203ENST00000475540 GALNT1Q10472 559 aaPredicted RBP7.17□□□□□ -1.26
SMC5-203ENST00000475540 NFRKBQ6P4R8 1299 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms