RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 SERGEFQ9UGK8 458 aa13.84□□□□□ -0.19
RTN4R-206ENST00000474642 IL17BQ9UHF5 180 aa13.84□□□□□ -0.19
RTN4R-206ENST00000474642 GGA2Q9UJY4 613 aa13.84□□□□□ -0.19
RTN4R-206ENST00000474642 SRPRBQ9Y5M8 271 aaKnown RBP13.84□□□□□ -0.19
RTN4R-206ENST00000474642 A0A1W2PP55 124 aa13.83□□□□□ -0.2
RTN4R-206ENST00000474642 USP12O75317 370 aa13.83□□□□□ -0.2
RTN4R-206ENST00000474642 RNASEH2AO75792 299 aaKnown RBP13.83□□□□□ -0.2
RTN4R-206ENST00000474642 POLR2EP19388 210 aaKnown RBP13.83□□□□□ -0.2
RTN4R-206ENST00000474642 HARS2P49590 506 aaKnown RBP13.83□□□□□ -0.2
RTN4R-206ENST00000474642 CCR5P51681 352 aa13.83□□□□□ -0.2
RTN4R-206ENST00000474642 KCNJ12Q14500 433 aa13.83□□□□□ -0.2
RTN4R-206ENST00000474642 PROX2Q3B8N5 592 aa13.83□□□□□ -0.2
RTN4R-206ENST00000474642 HS1BP3Q53T59 392 aa13.83□□□□□ -0.2
RTN4R-206ENST00000474642 NELFCDQ8IXH7 590 aa13.83□□□□□ -0.2
RTN4R-206ENST00000474642 FAM217AQ8IXS0 508 aa13.83□□□□□ -0.2
RTN4R-206ENST00000474642 ZNF507Q8TCN5 953 aa13.83□□□□□ -0.2
RTN4R-206ENST00000474642 SNRNP27Q8WVK2 155 aaKnown RBP13.83□□□□□ -0.2
RTN4R-206ENST00000474642 PLD4Q96BZ4 506 aa13.83□□□□□ -0.2
RTN4R-206ENST00000474642 TMA16Q96EY4 203 aaKnown RBP13.83□□□□□ -0.2
RTN4R-206ENST00000474642 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.83□□□□□ -0.2
RTN4R-206ENST00000474642 TRIM4Q9C037 500 aa13.83□□□□□ -0.2
RTN4R-206ENST00000474642 MTG2Q9H4K7 406 aa13.83□□□□□ -0.2
RTN4R-206ENST00000474642 FBXO2Q9UK22 296 aaPredicted RBP13.83□□□□□ -0.2
RTN4R-206ENST00000474642 CLIC4Q9Y696 253 aa13.83□□□□□ -0.2
RTN4R-206ENST00000474642 MID1O15344 667 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 SIGLEC6O43699 453 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 EXOC3O60645 756 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 DXOO77932 396 aaKnown RBP13.82□□□□□ -0.2
RTN4R-206ENST00000474642 VNN1O95497 513 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 LSSP48449 732 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 ZNF445P59923 1031 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 ST8SIA6P61647 398 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 SNRPFP62306 86 aaKnown RBP13.82□□□□□ -0.2
RTN4R-206ENST00000474642 CST6Q15828 149 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 SGSM1Q2NKQ1 1148 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 KIAA1614Q5VZ46 1190 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 KANSL1Q7Z3B3 1105 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 ARHGAP18Q8N392 663 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.82□□□□□ -0.2
RTN4R-206ENST00000474642 VCPIP1Q96JH7 1222 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 DEPDC7Q96QD5 511 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 POLR1BQ9H9Y6 1135 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 THSD1Q9NS62 852 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 USP3Q9Y6I4 520 aa13.82□□□□□ -0.2
RTN4R-206ENST00000474642 LRRIQ3A6PVS8 624 aaPredicted RBP13.81□□□□□ -0.2
RTN4R-206ENST00000474642 TRIM38O00635 465 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 MAGEC1O60732 1142 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 SDC3O75056 442 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 SIN3BO75182 1162 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 C4BPAP04003 597 aaKnown RBP13.81□□□□□ -0.2
RTN4R-206ENST00000474642 NTRK1P04629 796 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 EHHADHQ08426 723 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 NFATC3Q12968 1075 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 ZNF211Q13398 564 aaPredicted RBP13.81□□□□□ -0.2
RTN4R-206ENST00000474642 COLEC12Q5KU26 742 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 FAM26FQ5R3K3 315 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 EPM2AIP1Q7L775 607 aaPredicted RBP13.81□□□□□ -0.2
RTN4R-206ENST00000474642 KIAA0907Q7Z7F0 614 aaPredicted RBP13.81□□□□□ -0.2
RTN4R-206ENST00000474642 SPATS2Q86XZ4 545 aaKnown RBP13.81□□□□□ -0.2
RTN4R-206ENST00000474642 MMAAQ8IVH4 418 aaKnown RBP13.81□□□□□ -0.2
RTN4R-206ENST00000474642 ZC3H3Q8IXZ2 948 aaKnown RBP13.81□□□□□ -0.2
RTN4R-206ENST00000474642 PDILTQ8N807 584 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 MFSD2AQ8NA29 543 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 OR14C36Q8NHC7 312 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 PLEKHO2Q8TD55 490 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 NT5C1AQ9BXI3 368 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 DUSP16Q9BY84 665 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 LRRC27Q9C0I9 530 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 FZD4Q9ULV1 537 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 TPX2Q9ULW0 747 aaKnown RBP13.81□□□□□ -0.2
RTN4R-206ENST00000474642 SMC3Q9UQE7 1217 aa13.81□□□□□ -0.2
RTN4R-206ENST00000474642 TDRD6O60522 2096 aaKnown RBP13.8□□□□□ -0.2
RTN4R-206ENST00000474642 A0A087X0B3 334 aa13.8□□□□□ -0.2
RTN4R-206ENST00000474642 K7ENP7 123 aa13.8□□□□□ -0.2
RTN4R-206ENST00000474642 OPA1O60313 960 aa13.8□□□□□ -0.2
RTN4R-206ENST00000474642 CSO75390 466 aaKnown RBP13.8□□□□□ -0.2
RTN4R-206ENST00000474642 RPN1P04843 607 aaKnown RBP13.8□□□□□ -0.2
RTN4R-206ENST00000474642 SLC8A1P32418 973 aa13.8□□□□□ -0.2
RTN4R-206ENST00000474642 YWHAGP61981 247 aaKnown RBP eCLIP13.8□□□□□ -0.2
RTN4R-206ENST00000474642 ASIC1P78348 528 aa13.8□□□□□ -0.2
RTN4R-206ENST00000474642 TRIP4Q15650 581 aaPredicted RBP13.8□□□□□ -0.2
RTN4R-206ENST00000474642 C6orf132Q5T0Z8 1188 aa13.8□□□□□ -0.2
RTN4R-206ENST00000474642 SPOPLQ6IQ16 392 aa13.8□□□□□ -0.2
RTN4R-206ENST00000474642 NAPEPLDQ6IQ20 393 aa13.8□□□□□ -0.2
RTN4R-206ENST00000474642 INO80CQ6PI98 192 aaPredicted RBP13.8□□□□□ -0.2
RTN4R-206ENST00000474642 SND1Q7KZF4 910 aaKnown RBP eCLIP13.8□□□□□ -0.2
RTN4R-206ENST00000474642 PARD3BQ8TEW8 1205 aa13.8□□□□□ -0.2
RTN4R-206ENST00000474642 TAF4BQ92750 862 aa13.8□□□□□ -0.2
RTN4R-206ENST00000474642 TWNKQ96RR1 684 aa13.8□□□□□ -0.2
RTN4R-206ENST00000474642 DNAI2Q9GZS0 605 aa13.8□□□□□ -0.2
RTN4R-206ENST00000474642 UBE4BO95155 1302 aa13.8□□□□□ -0.2
RTN4R-206ENST00000474642 TBC1D3DA0A087WVF3 549 aa13.79□□□□□ -0.2
RTN4R-206ENST00000474642 TBC1D3IA0A087WXS9 549 aa13.79□□□□□ -0.2
RTN4R-206ENST00000474642 TBC1D3EA0A087X179 549 aa13.79□□□□□ -0.2
RTN4R-206ENST00000474642 TBC1D3KA0A087X1G2 549 aa13.79□□□□□ -0.2
RTN4R-206ENST00000474642 TBC1D3FA6NER0 549 aaPredicted RBP13.79□□□□□ -0.2
RTN4R-206ENST00000474642 TBC1D3LB9A6J9 549 aa13.79□□□□□ -0.2
RTN4R-206ENST00000474642 TBC1D3HP0C7X1 549 aa13.79□□□□□ -0.2
RTN4R-206ENST00000474642 GOT1P17174 413 aa13.79□□□□□ -0.2
RTN4R-206ENST00000474642 RBMS1P29558 406 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms