RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 SLC8A3P57103 927 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 TAS2R40P59535 323 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 FKBP1BP68106 108 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 IL9RQ01113 521 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 ARHGAP1Q07960 439 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 FSTL1Q12841 308 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 KLF1Q13351 362 aaPredicted RBP6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 KRT81Q14533 505 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 ITIH4Q14624 930 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 TRIP13Q15645 432 aaPredicted RBP6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 CNGA2Q16280 664 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 KLHL38Q2WGJ6 581 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 P3H1Q32P28 736 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 ERMARDQ5T6L9 678 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 MTHFD1LQ6UB35 978 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 C4orf22Q6V702 233 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 RFX6Q8HWS3 928 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 ZDHHC17Q8IUH5 632 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 CNPY4Q8N129 248 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 ALLCQ8N6M5 410 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 GBP7Q8N8V2 638 aaPredicted RBP6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 BEST2Q8NFU1 509 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 OR6J1Q8NGC5 347 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 AFG1LQ8WV93 481 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 ATG4AQ8WYN0 398 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 RAPGEF5Q92565 580 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 ARHGEF2Q92974 986 aaKnown RBP6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 NKD2Q969F2 451 aaPredicted RBP6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 CLMNQ96JQ2 1002 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 ZNF560Q96MR9 790 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 RBM15Q96T37 977 aaKnown RBP eCLIP6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 NT5C1AQ9BXI3 368 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 FRMD8Q9BZ67 464 aaPredicted RBP6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 RABEP2Q9H5N1 569 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 VPS37BQ9H9H4 285 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 RSAD1Q9HA92 442 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 SAYSD1Q9NPB0 183 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 KCNK9Q9NPC2 374 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 UBN1Q9NPG3 1134 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 DPP3Q9NY33 737 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 GMIPQ9P107 970 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 BARX2Q9UMQ3 279 aaPredicted RBP6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 AGAP1Q9UPQ3 857 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 SMG5Q9UPR3 1016 aaKnown RBP6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 TELO2Q9Y4R8 837 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 PCDHB14Q9Y5E9 798 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 IKBKGQ9Y6K9 419 aa6.13□□□□□ -1.43
ATPAF1-204ENST00000474020 A0A087WZ62 844 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 CCL15-CCL14A0A0B4J2E2 113 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 RBM47A0AV96 593 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 C5orf60A6NFR6 353 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 DNALI1O14645 258 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 B4GALT5O43286 388 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 FAM189A1O60320 539 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 SPAG6O75602 509 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 TOMM70O94826 608 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 SUN1O94901 812 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 CALCAP01258 141 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 IFNB1P01574 187 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 CD4P01730 458 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 HPXP02790 462 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 SHBGP04278 402 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 ERBB2P04626 1255 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 ZFXP17010 805 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 AXLP30530 894 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 SDC4P31431 198 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 STX2P32856 288 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 PCK1P35558 622 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 PNPLA4P41247 253 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 HK2P52789 917 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 SEC24CP53992 1094 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 ROR1Q01973 937 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 EGR3Q06889 387 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 GPS1Q13098 491 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 IFT88Q13099 833 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 AUHQ13825 339 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 PDK2Q15119 407 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 LLGL1Q15334 1064 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 ZNF124Q15973 351 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 CCL15Q16663 113 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 C2CD6Q53TS8 623 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 FAM102AQ5T9C2 384 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 CYP4A22Q5TCH4 519 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 EEF1DP3Q658K8 133 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 IQSEC1Q6DN90 963 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 JADE1Q6IE81 842 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 OR6B2Q6IFH4 312 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 HIBCHQ6NVY1 386 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 DENND1BQ6P3S1 775 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 RHBDF2Q6PJF5 856 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 BBS12Q6ZW61 710 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 DPH6Q7L8W6 267 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 CATSPER4Q7RTX7 472 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 PLEKHH3Q7Z736 793 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 ANKRD23Q86SG2 305 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 SESTD1Q86VW0 696 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 PPIL6Q8IXY8 311 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 HACE1Q8IYU2 909 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 PDIK1LQ8N165 341 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 ATP11CQ8NB49 1132 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms