RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 POM121BA6NF01 834 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 A6NNC1 897 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 RHODO00212 210 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 IFNA2P01563 188 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 FGFR2P21802 821 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 PIK3CBP42338 1070 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 ENTPD1P49961 510 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 LTBQ06643 244 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 ZNF543Q08ER8 600 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 TTC39AQ5SRH9 613 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 RAP1GAP2Q684P5 730 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 ZNF324BQ6AW86 544 aaPredicted RBP3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 HMBOX1Q6NT76 420 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 SLC39A5Q6ZMH5 540 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 PIK3AP1Q6ZUJ8 805 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 CYB5R4Q7L1T6 521 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 DDIASQ8IXT1 998 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 NEUROG1Q92886 237 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 EIF2AQ9BY44 585 aaKnown RBP3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 ISCUQ9H1K1 167 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 TXLNGQ9NUQ3 528 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 WNT16Q9UBV4 365 aa3.92□□□□□ -1.78
PRPF40A-207ENST00000471701 HOXC6P09630 235 aa3.91□□□□□ -1.78
PRPF40A-207ENST00000471701 RFPL3SP0C7P2 107 aa3.91□□□□□ -1.78
PRPF40A-207ENST00000471701 ATF3P18847 181 aa3.91□□□□□ -1.78
PRPF40A-207ENST00000471701 MST1P26927 711 aa3.91□□□□□ -1.78
PRPF40A-207ENST00000471701 CSHL1Q14406 222 aa3.91□□□□□ -1.78
PRPF40A-207ENST00000471701 TTLL5Q6EMB2 1281 aa3.91□□□□□ -1.78
PRPF40A-207ENST00000471701 ZNF474Q6S9Z5 364 aaPredicted RBP3.91□□□□□ -1.78
PRPF40A-207ENST00000471701 SPATA2LQ8IUW3 424 aaPredicted RBP3.91□□□□□ -1.78
PRPF40A-207ENST00000471701 MIB2Q96AX9 1013 aa3.91□□□□□ -1.78
PRPF40A-207ENST00000471701 FAM84BQ96KN1 310 aaPredicted RBP3.91□□□□□ -1.78
PRPF40A-207ENST00000471701 MYO1AQ9UBC5 1043 aa3.91□□□□□ -1.78
PRPF40A-207ENST00000471701 PCDHB7Q9Y5E2 793 aa3.91□□□□□ -1.78
PRPF40A-207ENST00000471701 CKAP5Q14008 2032 aa3.9□□□□□ -1.78
PRPF40A-207ENST00000471701 OR2W5A6NFC9 320 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 APOL1O14791 398 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 NPC1O15118 1278 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 FGF3P11487 239 aaPredicted RBP3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 TGM2P21980 687 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 STT3AP46977 705 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 EGR4Q05215 589 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 SLC5A9Q2M3M2 681 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 ARL13BQ3SXY8 428 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 ARHGAP15Q53QZ3 475 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 WDR93Q6P2C0 686 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 PARM1Q6UWI2 310 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 RASGRP3Q8IV61 690 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 WDR75Q8IWA0 830 aaKnown RBP3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 TXLNBQ8N3L3 684 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 ADPRHL1Q8NDY3 354 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 TSR2Q969E8 191 aaKnown RBP3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 FAR2Q96K12 515 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 SFXN1Q9H9B4 322 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 SIRT3Q9NTG7 399 aaPredicted RBP3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 GJB4Q9NTQ9 266 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 TNFSF13BQ9Y275 285 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 MAN2B2Q9Y2E5 1009 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 UBE2J1Q9Y385 318 aaPredicted RBP3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 LMTK3Q96Q04 1460 aa3.9□□□□□ -1.79
PRPF40A-207ENST00000471701 PNMA6EA0A0J9YXQ4 647 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 GAGE12JA6NER3 117 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 M0QZQ0 153 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 KPNA5O15131 536 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 MDM4O15151 490 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 PPP6R2O75170 966 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 KLKB1P03952 638 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 CYP1A2P05177 515 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 PLA2G2AP14555 144 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 CPA1P15085 419 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 PECAM1P16284 738 aaPredicted RBP3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 MT3P25713 68 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 HOXA11P31270 313 aaPredicted RBP3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 RFX2P48378 723 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 ROR2Q01974 943 aaKnown RBP3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 NSUN2Q08J23 767 aaKnown RBP eCLIP3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 SLC4A8Q2Y0W8 1093 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 ODF3L2Q3SX64 289 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 Q5PR19 223 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 CYB5RLQ6IPT4 315 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 TRILQ7L0X0 811 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 OR52N4Q8NGI2 321 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 ELP5Q8TE02 316 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 INPP5DQ92835 1189 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 LMLNQ96KR4 655 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 ZNF347Q96SE7 839 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 COLEC11Q9BWP8 271 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 SEZ6LQ9BYH1 1024 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 MYO6Q9UM54 1294 aa3.89□□□□□ -1.79
PRPF40A-207ENST00000471701 OR6C75A6NL08 312 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 FOXO6A8MYZ6 492 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 CNTN5O94779 1100 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 PAPSS2O95340 614 aaPredicted RBP3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 NDST3O95803 873 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 WNT1P04628 370 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 ACAA1P09110 424 aaPredicted RBP3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 EGR1P18146 543 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 SLC37A1P57057 533 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 IFIT5Q13325 482 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms