RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 TMPRSS7Q7RTY8 843 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 LINC00528Q8N1L1 170 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 PNPLA1Q8N8W4 532 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 RHBDD1Q8TEB9 315 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 GOLGA1Q92805 767 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 SKA1Q96BD8 255 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 UBXN6Q9BZV1 441 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 OSGEPQ9NPF4 335 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 EIF2B4Q9UI10 523 aaKnown RBP9.54□□□□□ -0.88
CPSF4-211ENST00000471455 NUDT5Q9UKK9 219 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 AGO1Q9UL18 857 aaKnown RBP9.54□□□□□ -0.88
CPSF4-211ENST00000471455 PLA2G4CQ9UP65 541 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 FNDC3AQ9Y2H6 1198 aaKnown RBP9.54□□□□□ -0.88
CPSF4-211ENST00000471455 USP3Q9Y6I4 520 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 ASPMQ8IZT6 3477 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 ADAMTS20P59510 1910 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 CABIN1Q9Y6J0 2220 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 CKAP5Q14008 2032 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 SLC12A8A0AV02 714 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 E9PAM4 449 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 TNFSF14O43557 240 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 STX10O60499 249 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 LILRA1O75019 489 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 LATS1O95835 1130 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 KLKB1P03952 638 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 DNTTP04053 509 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 NR2F2P24468 414 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 PRKCHP24723 683 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 CASP1P29466 404 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 GTF2H1P32780 548 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 GRIA4P48058 902 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 COPAP53621 1224 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 BCAT1P54687 386 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 YWHAGP61981 247 aaKnown RBP eCLIP9.53□□□□□ -0.88
CPSF4-211ENST00000471455 STK4Q13043 487 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 COL28A1Q2UY09 1125 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 FNDC3BQ53EP0 1204 aaKnown RBP9.53□□□□□ -0.88
CPSF4-211ENST00000471455 ADAT2Q7Z6V5 191 aaKnown RBP9.53□□□□□ -0.88
CPSF4-211ENST00000471455 SCD5Q86SK9 330 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 CACUL1Q86Y37 369 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 DENND1CQ8IV53 801 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 KIAA0895Q8NCT3 520 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 BAHD1Q8TBE0 780 aaPredicted RBP9.53□□□□□ -0.88
CPSF4-211ENST00000471455 RNF139Q8WU17 664 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 IGSF8Q969P0 613 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 PIWIL1Q96J94 861 aaKnown RBP9.53□□□□□ -0.88
CPSF4-211ENST00000471455 HEXIM2Q96MH2 286 aaKnown RBP9.53□□□□□ -0.88
CPSF4-211ENST00000471455 TWNKQ96RR1 684 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 BTBD1Q9H0C5 482 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 KCTD10Q9H3F6 313 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 IL21RQ9HBE5 538 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 TMEM8AQ9HCN3 771 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 TRAF3IP3Q9Y228 551 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 SPEGQ15772 3267 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 KNL1Q8NG31 2342 aa9.53□□□□□ -0.88
CPSF4-211ENST00000471455 GOLGA4Q13439 2230 aaKnown RBP9.52□□□□□ -0.88
CPSF4-211ENST00000471455 URB1O60287 2271 aaKnown RBP9.52□□□□□ -0.89
CPSF4-211ENST00000471455 A0A1B0GVT2 93 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 TYW5A2RUC4 315 aaKnown RBP9.52□□□□□ -0.89
CPSF4-211ENST00000471455 KCNJ18B7U540 433 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 ERVH48-1M5A8F1 160 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 PCDHGA12O60330 932 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 SEMA4FO95754 770 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 ATP5BP06576 529 aaKnown RBP9.52□□□□□ -0.89
CPSF4-211ENST00000471455 HSP90AA1P07900 732 aaKnown RBP9.52□□□□□ -0.89
CPSF4-211ENST00000471455 CDK4P11802 303 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 PSMC2P35998 433 aaKnown RBP9.52□□□□□ -0.89
CPSF4-211ENST00000471455 GCLMP48507 274 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 CAMK2GQ13555 558 aaPredicted RBP9.52□□□□□ -0.89
CPSF4-211ENST00000471455 NFIL3Q16649 462 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 KRT39Q6A163 491 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 DBX2Q6ZNG2 339 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 SLCO6A1Q86UG4 719 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 FAM124AQ86V42 546 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 FAM217AQ8IXS0 508 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 FAM186BQ8IYM0 893 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 AHI1Q8N157 1196 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 MDM1Q8TC05 714 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 TAS1R2Q8TE23 839 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 ELMO3Q96BJ8 720 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 PAGE5Q96GU1 130 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 IPO9Q96P70 1041 aaKnown RBP9.52□□□□□ -0.89
CPSF4-211ENST00000471455 LRRC4Q9HBW1 653 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 SGK2Q9HBY8 427 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 HESX1Q9UBX0 185 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 FTSJ1Q9UET6 329 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 TPX2Q9ULW0 747 aaKnown RBP9.52□□□□□ -0.89
CPSF4-211ENST00000471455 SCML1Q9UN30 329 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 PCDHA7Q9UN72 937 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 NCKAP1Q9Y2A7 1128 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 RAXQ9Y2V3 346 aa9.52□□□□□ -0.89
CPSF4-211ENST00000471455 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.52□□□□□ -0.89
CPSF4-211ENST00000471455 HBS1LQ9Y450 684 aaKnown RBP9.52□□□□□ -0.89
CPSF4-211ENST00000471455 YKT6O15498 198 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 KLRC4O43908 158 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 RNASEH1O60930 286 aaKnown RBP9.51□□□□□ -0.89
CPSF4-211ENST00000471455 DKK1O94907 266 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 ZBED1O96006 694 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 ATXN1LP0C7T5 689 aaKnown RBP9.51□□□□□ -0.89
CPSF4-211ENST00000471455 TRIM49P0CI25 452 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms