RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 PCDHGA8Q9Y5G5 932 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 ZNF106Q9H2Y7 1883 aaKnown RBP6.17□□□□□ -1.42
VARS-222ENST00000470953 ANK2Q01484 3957 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 PKD1L1Q8TDX9 2849 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 GOLGA8IPA6NC78 632 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 PRR19A6NJB7 356 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 GOLGA8JA6NMD2 632 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 TISP43B9A030 160 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 NEDD8-MDP1E9PL57 170 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 KIAA0391O15091 583 aaKnown RBP6.16□□□□□ -1.42
VARS-222ENST00000470953 SIGLEC6O43699 453 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 FAM189A1O60320 539 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 SDC3O75056 442 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 PPP1R37O75864 691 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 PRPF6O94906 941 aaKnown RBP6.16□□□□□ -1.42
VARS-222ENST00000470953 LDHAP00338 332 aaKnown RBP6.16□□□□□ -1.42
VARS-222ENST00000470953 TNNC2P02585 160 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 KRT19P08727 400 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 THEGLP0DJG4 465 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 MBL2P11226 248 aaPredicted RBP6.16□□□□□ -1.42
VARS-222ENST00000470953 ACADMP11310 421 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 PFKFB1P16118 471 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 CD27P26842 260 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 SYKP43405 635 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 CASP5P51878 434 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 NUCB2P80303 420 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 ORC1Q13415 861 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 ISXQ2M1V0 245 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 SKOR2Q2VWA4 1001 aaPredicted RBP6.16□□□□□ -1.42
VARS-222ENST00000470953 SV2CQ496J9 727 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 MANEAQ5SRI9 462 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 RESP18Q5W5W9 173 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 UNC13DQ70J99 1090 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 GDF7Q7Z4P5 450 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 OSTM1Q86WC4 334 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 NELFCDQ8IXH7 590 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 ARL14Q8N4G2 192 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 ZSCAN1Q8NBB4 408 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 GLIS1Q8NBF1 620 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 TTC13Q8NBP0 860 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 CACTINQ8WUQ7 758 aaKnown RBP6.16□□□□□ -1.42
VARS-222ENST00000470953 LEO1Q8WVC0 666 aaPredicted RBP6.16□□□□□ -1.42
VARS-222ENST00000470953 SCFD1Q8WVM8 642 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 SORCS1Q8WY21 1168 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 BHMTQ93088 406 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 HPS3Q969F9 1004 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 DNAJC19Q96DA6 116 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 ANKRD36BP1Q96IX9 119 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 ACE2Q9BYF1 805 aaPredicted RBP6.16□□□□□ -1.42
VARS-222ENST00000470953 KRTAP17-1Q9BYP8 105 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 PCED1AQ9H1Q7 454 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 BLZF1Q9H2G9 400 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 PCIF1Q9H4Z3 704 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 ASB7Q9H672 318 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 TBC1D14Q9P2M4 693 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 USP25Q9UHP3 1055 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 CPSF3Q9UKF6 684 aaKnown RBP6.16□□□□□ -1.42
VARS-222ENST00000470953 DSEQ9UL01 958 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 PPM1HQ9ULR3 514 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 DERAQ9Y315 318 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 C2CD2Q9Y426 696 aa6.16□□□□□ -1.42
VARS-222ENST00000470953 NOTCH1P46531 2555 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 FLNAP21333 2647 aaKnown RBP6.15□□□□□ -1.42
VARS-222ENST00000470953 PRRC2CQ9Y520 2896 aaKnown RBP6.15□□□□□ -1.42
VARS-222ENST00000470953 A0A1B0GVL5 298 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 A0A1B0GVM2 712 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 A0A1W2PR77 199 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 FRMD3A2A2Y4 597 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 ANKRD63C9JTQ0 380 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 EIF3DO15371 548 aaKnown RBP eCLIP6.15□□□□□ -1.42
VARS-222ENST00000470953 COCHO43405 550 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 CACNG3O60359 315 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 GREM1O60565 184 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 ATP2C2O75185 946 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 KIF20AO95235 890 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 SEMA4FO95754 770 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 ADRB2P07550 413 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 IRF1P10914 325 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 TYRP14679 529 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 PFKLP17858 780 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 GARTP22102 1010 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 PAX3P23760 479 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 PRKCHP24723 683 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 POLR2BP30876 1174 aaKnown RBP6.15□□□□□ -1.42
VARS-222ENST00000470953 SLC5A2P31639 672 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 ANP32AP39687 249 aaKnown RBP6.15□□□□□ -1.42
VARS-222ENST00000470953 PNPLA4P41247 253 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 TAF6P49848 677 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 CYP2J2P51589 502 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 RACK1P63244 317 aaKnown RBP6.15□□□□□ -1.42
VARS-222ENST00000470953 TSPY1Q01534 308 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 LTBQ06643 244 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 KCNA1Q09470 495 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 ENPP2Q13822 863 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 STARD3Q14849 445 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 E2F4Q16254 413 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 NFE2Q16621 373 aaPredicted RBP6.15□□□□□ -1.42
VARS-222ENST00000470953 GEN1Q17RS7 908 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 LACTB2Q53H82 288 aaPredicted RBP6.15□□□□□ -1.42
VARS-222ENST00000470953 INTS6LQ5JSJ4 861 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms