RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TSC1Q92574 1164 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 SERAC1Q96JX3 654 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 HEXIM2Q96MH2 286 aaKnown RBP19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 C7orf25Q9BPX7 421 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 NEUROG2Q9H2A3 272 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 BLZF1Q9H2G9 400 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 EBF2Q9HAK2 575 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 HECTD1Q9ULT8 2610 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 MID1O15344 667 aa19.76■□□□□ 0.75
NCKIPSD-209ENST00000470006 CASP1P29466 404 aa19.76■□□□□ 0.75
NCKIPSD-209ENST00000470006 TMPRSS3P57727 454 aa19.76■□□□□ 0.75
NCKIPSD-209ENST00000470006 ZNF445P59923 1031 aa19.76■□□□□ 0.75
NCKIPSD-209ENST00000470006 RHDQ02161 417 aa19.76■□□□□ 0.75
NCKIPSD-209ENST00000470006 KCNC4Q03721 635 aa19.76■□□□□ 0.75
NCKIPSD-209ENST00000470006 E2F4Q16254 413 aa19.76■□□□□ 0.75
NCKIPSD-209ENST00000470006 ERICH1Q86X53 443 aa19.76■□□□□ 0.75
NCKIPSD-209ENST00000470006 FAM181AQ8N9Y4 354 aa19.76■□□□□ 0.75
NCKIPSD-209ENST00000470006 OR2T34Q8NGX1 318 aa19.76■□□□□ 0.75
NCKIPSD-209ENST00000470006 RSPH9Q9H1X1 276 aaPredicted RBP19.76■□□□□ 0.75
NCKIPSD-209ENST00000470006 CYP3A43Q9HB55 503 aa19.76■□□□□ 0.75
NCKIPSD-209ENST00000470006 CPNE5Q9HCH3 593 aa19.76■□□□□ 0.75
NCKIPSD-209ENST00000470006 SERGEFQ9UGK8 458 aa19.76■□□□□ 0.75
NCKIPSD-209ENST00000470006 TLR4O00206 839 aa19.75■□□□□ 0.75
NCKIPSD-209ENST00000470006 SIN3BO75182 1162 aa19.75■□□□□ 0.75
NCKIPSD-209ENST00000470006 SLC8A3P57103 927 aa19.75■□□□□ 0.75
NCKIPSD-209ENST00000470006 PCBP4P57723 403 aaKnown RBP19.75■□□□□ 0.75
NCKIPSD-209ENST00000470006 TRIP4Q15650 581 aaPredicted RBP19.75■□□□□ 0.75
NCKIPSD-209ENST00000470006 KMT5BQ4FZB7 885 aa19.75■□□□□ 0.75
NCKIPSD-209ENST00000470006 DHX40Q8IX18 779 aaKnown RBP19.75■□□□□ 0.75
NCKIPSD-209ENST00000470006 ZC3H3Q8IXZ2 948 aaKnown RBP19.75■□□□□ 0.75
NCKIPSD-209ENST00000470006 CCDC150Q8NCX0 1101 aa19.75■□□□□ 0.75
NCKIPSD-209ENST00000470006 RNF139Q8WU17 664 aa19.75■□□□□ 0.75
NCKIPSD-209ENST00000470006 OLA1Q9NTK5 396 aaKnown RBP19.75■□□□□ 0.75
NCKIPSD-209ENST00000470006 ADAMTS1Q9UHI8 967 aa19.75■□□□□ 0.75
NCKIPSD-209ENST00000470006 WNT9AO14904 365 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 ARHGAP6O43182 974 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 TBL1XO60907 577 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 C7P10643 843 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 CD70P32970 193 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 TKTL1P51854 596 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 UCNP55089 124 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 INSM1Q01101 510 aaPredicted RBP19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 LY6DQ14210 128 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 CST6Q15828 149 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 ADGRF1Q5T601 910 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 CEP135Q66GS9 1140 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 CNNM4Q6P4Q7 775 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 PIGZQ86VD9 579 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 MMAAQ8IVH4 418 aaKnown RBP19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 OXR1Q8N573 874 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 OR14C36Q8NHC7 312 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 NDRG1Q92597 394 aaKnown RBP19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 STIM2Q9P246 746 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 SFMBT1Q9UHJ3 866 aa19.74■□□□□ 0.75
NCKIPSD-209ENST00000470006 A0A1W2PR77 199 aa19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 ZBED1O96006 694 aa19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 MT-CO3P00414 261 aa19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 SLFN14P0C7P3 912 aa19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 SLC8A1P32418 973 aa19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 NXPH1P58417 271 aa19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 DAB2P98082 770 aa19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 EHHADHQ08426 723 aa19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 KCNJ12Q14500 433 aa19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 KIAA0907Q7Z7F0 614 aaPredicted RBP19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 DCBLD1Q8N8Z6 715 aa19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 TMC2Q8TDI7 906 aa19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 WBP1Q96G27 269 aa19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 MMRN2Q9H8L6 949 aa19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 APOBEC3GQ9HC16 384 aaKnown RBP19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 FRMD4BQ9Y2L6 1034 aa19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 HBS1LQ9Y450 684 aaKnown RBP19.73■□□□□ 0.75
NCKIPSD-209ENST00000470006 ARID1BQ8NFD5 2236 aaPredicted RBP19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 TBC1D3DA0A087WVF3 549 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 TBC1D3IA0A087WXS9 549 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 TBC1D3EA0A087X179 549 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 TBC1D3KA0A087X1G2 549 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 TBC1D3FA6NER0 549 aaPredicted RBP19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 B8ZZF3 427 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 TBC1D3LB9A6J9 549 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 IKBKBO14920 756 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 SDC3O75056 442 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 TBC1D3HP0C7X1 549 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 AFMP43652 599 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 PSMD8P48556 350 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 CCR5P51681 352 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 SGSHP51688 502 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 E2F1Q01094 437 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 HS1BP3Q53T59 392 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 TBC1D3GQ6DHY5 549 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 TBC1D3CQ6IPX1 549 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 RFWD3Q6PCD5 774 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 SND1Q7KZF4 910 aaKnown RBP eCLIP19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 MFN1Q8IWA4 741 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 TBC1D3Q8IZP1 549 aaPredicted RBP19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 CACTIN-AS1Q8N1I8 211 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 WFDC5Q8TCV5 224 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 EDEM1Q92611 657 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 ZNF578Q96N58 590 aaPredicted RBP19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 ULBP1Q9BZM6 244 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms