RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 TM9SF3Q9HD45 589 aa13.19□□□□□ -0.3
GAPVD1-214ENST00000469528 SCUBE2Q9NQ36 999 aa13.19□□□□□ -0.3
GAPVD1-214ENST00000469528 SNX11Q9Y5W9 270 aa13.19□□□□□ -0.3
GAPVD1-214ENST00000469528 SPEGQ15772 3267 aa13.19□□□□□ -0.3
GAPVD1-214ENST00000469528 LRRC72A6NJI9 287 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 GOLGA8CPA6NN73 597 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 YJEFN3A6XGL0 299 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 E7ENQ6 273 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 TBL1XO60907 577 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 DKK1O94907 266 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 FBXO21O94952 628 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 ATXN1LP0C7T5 689 aaKnown RBP13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 LCP1P13796 627 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 RACK1P63244 317 aaKnown RBP13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 BNC1Q01954 994 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 PKP1Q13835 747 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 CNGA2Q16280 664 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 DCAF17Q5H9S7 520 aaPredicted RBP13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 PIK3R6Q5UE93 754 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 C19orf48Q6RUI8 117 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 LCLAT1Q6UWP7 414 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 CACUL1Q86Y37 369 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 FIBINQ8TAL6 211 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 UBA3Q8TBC4 463 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 TTC17Q96AE7 1141 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 HSFY1Q96LI6 401 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 GSDMAQ96QA5 445 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 TRIM62Q9BVG3 475 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 METTL14Q9HCE5 456 aaKnown RBP13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 ARMCX3Q9UH62 379 aaPredicted RBP13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 HOOK1Q9UJC3 728 aaKnown RBP13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 ANKRD11Q6UB99 2663 aaPredicted RBP13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 PKD1L2Q7Z442 2459 aa13.18□□□□□ -0.3
GAPVD1-214ENST00000469528 TARSL2A2RTX5 802 aaKnown RBP13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 TRABD2BA6NFA1 517 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 VILLO15195 856 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 YKT6O15498 198 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 SART1O43290 800 aaKnown RBP13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 ACSL4O60488 711 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 SMC2O95347 1197 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 C1SP09871 688 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 PRR29P0C7W0 189 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 NNMTP40261 264 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 TBX4P57082 545 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 DAOAP59103 153 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 NUCB2P80303 420 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 PTPRNQ16849 979 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 SLC45A4Q5BKX6 768 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 ZNF658Q5TYW1 1059 aaPredicted RBP13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 KIAA0895LQ68EN5 471 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 MSANTD2Q6P1R3 559 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 PDZD3Q86UT5 571 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 TMPRSS12Q86WS5 348 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 MFN1Q8IWA4 741 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 HJURPQ8NCD3 748 aaPredicted RBP13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 SLC35F5Q8WV83 523 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 HNRNPLLQ8WVV9 542 aaKnown RBP13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 NDRG1Q92597 394 aaKnown RBP13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 PPP1R9BQ96SB3 815 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 OMDQ99983 421 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 RSPH9Q9H1X1 276 aaPredicted RBP13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 FBXL12Q9NXK8 326 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 FTSJ1Q9UET6 329 aa13.17□□□□□ -0.3
GAPVD1-214ENST00000469528 BAHCC1Q9P281 2608 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 A0A1W2PPC4 97 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 GOLGA6L4A6NEF3 574 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 TULP2O00295 520 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 O00370 1275 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 PAPSS1O43252 624 aaPredicted RBP13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 LTFP02788 710 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 SRPRAP08240 638 aaKnown RBP13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 LRRC63Q05C16 580 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 STIM1Q13586 685 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 ARID5BQ14865 1188 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 SMAD1Q15797 465 aaKnown RBP13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 COL28A1Q2UY09 1125 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 CBWD6Q4V339 395 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 COBLL1Q53SF7 1204 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 CBWD3Q5JTY5 395 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 CBWD5Q5RIA9 395 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 RNF219Q5W0B1 726 aaPredicted RBP13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 TMEM270Q6UE05 265 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 BHLHA9Q7RTU4 235 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 SCUBE3Q8IX30 993 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 MDM1Q8TC05 714 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 EEF2KMTQ96G04 330 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 SERPINB11Q96P15 392 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 PABPC3Q9H361 631 aaKnown RBP13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 TOR4AQ9NXH8 423 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 STIM2Q9P246 746 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 SLC12A6Q9UHW9 1150 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 FZD4Q9ULV1 537 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 PCDHGA1Q9Y5H4 931 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 NBEAQ8NFP9 2946 aa13.16□□□□□ -0.3
GAPVD1-214ENST00000469528 CKAP5Q14008 2032 aa13.15□□□□□ -0.3
GAPVD1-214ENST00000469528 FAM47DPA6NHR8 397 aa13.15□□□□□ -0.3
GAPVD1-214ENST00000469528 PMM2O15305 246 aa13.15□□□□□ -0.3
GAPVD1-214ENST00000469528 IGLV3-27P01718 113 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms