RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 SLC44A3Q8N4M1 653 aa11.65□□□□□ -0.54
MSH5-214ENST00000468602 ATP2A3Q93084 1043 aa11.65□□□□□ -0.54
MSH5-214ENST00000468602 MSANTD3Q96H12 275 aa11.65□□□□□ -0.54
MSH5-214ENST00000468602 TRMT61BQ9BVS5 477 aaKnown RBP11.65□□□□□ -0.54
MSH5-214ENST00000468602 SLC2A11Q9BYW1 496 aa11.65□□□□□ -0.54
MSH5-214ENST00000468602 PLA2G2FQ9BZM2 168 aa11.65□□□□□ -0.54
MSH5-214ENST00000468602 SMG9Q9H0W8 520 aaKnown RBP11.65□□□□□ -0.54
MSH5-214ENST00000468602 CARD9Q9H257 536 aa11.65□□□□□ -0.54
MSH5-214ENST00000468602 SMPD4Q9NXE4 827 aa11.65□□□□□ -0.54
MSH5-214ENST00000468602 NUMBLQ9Y6R0 609 aa11.65□□□□□ -0.54
MSH5-214ENST00000468602 A0A0A0MRY4 1105 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 FAM170AA1A519 330 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 KIF2AO00139 706 aaPredicted RBP11.64□□□□□ -0.55
MSH5-214ENST00000468602 FGF10O15520 208 aaPredicted RBP11.64□□□□□ -0.55
MSH5-214ENST00000468602 LRIG2O94898 1065 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 NFATC1O95644 943 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 TACR2P21452 398 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 KDELR1P24390 212 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 SLC6A4P31645 630 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 NAP1L1P55209 391 aaKnown RBP11.64□□□□□ -0.55
MSH5-214ENST00000468602 RWDD2BP57060 319 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 ETF1P62495 437 aaKnown RBP11.64□□□□□ -0.55
MSH5-214ENST00000468602 DPYSQ14117 519 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 MPPE1Q53F39 396 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 TJAP1Q5JTD0 557 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 FYB2Q5VWT5 728 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 PAPD7Q5XG87 772 aaKnown RBP11.64□□□□□ -0.55
MSH5-214ENST00000468602 TXNRD3NBQ6F5E7 133 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 RHBDF2Q6PJF5 856 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 ZNF783Q6ZMS7 281 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 KIAA0907Q7Z7F0 614 aaPredicted RBP11.64□□□□□ -0.55
MSH5-214ENST00000468602 NLRP14Q86W24 1093 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 CPNE8Q86YQ8 564 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 UBL4BQ8N7F7 174 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.64□□□□□ -0.55
MSH5-214ENST00000468602 IRF7Q92985 503 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 RNF34Q969K3 372 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 ASIC4Q96FT7 647 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 RBM41Q96IZ5 413 aaKnown RBP11.64□□□□□ -0.55
MSH5-214ENST00000468602 EPAS1Q99814 870 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 PCDH18Q9HCL0 1135 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 HPS4Q9NQG7 708 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 SPHK2Q9NRA0 654 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 TMEM248Q9NWD8 314 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 DUS2Q9NX74 493 aaKnown RBP11.64□□□□□ -0.55
MSH5-214ENST00000468602 TRMT1Q9NXH9 659 aaKnown RBP11.64□□□□□ -0.55
MSH5-214ENST00000468602 XPO7Q9UIA9 1087 aaKnown RBP11.64□□□□□ -0.55
MSH5-214ENST00000468602 TTC7AQ9ULT0 858 aaPredicted RBP11.64□□□□□ -0.55
MSH5-214ENST00000468602 TBC1D30Q9Y2I9 924 aa11.64□□□□□ -0.55
MSH5-214ENST00000468602 F5P12259 2224 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 A0A1B0GVM2 712 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 TCAF2A6NFQ2 919 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 E9PAM4 449 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 F5H5T6 163 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 CACNG3O60359 315 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 CLDN11O75508 207 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 ZRANB2O95218 330 aaKnown RBP eCLIP11.63□□□□□ -0.55
MSH5-214ENST00000468602 RHOQP17081 205 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 MAPKAPK2P49137 400 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 VASPP50552 380 aaPredicted RBP11.63□□□□□ -0.55
MSH5-214ENST00000468602 PLK1P53350 603 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 CDH4P55283 916 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 OXCT1P55809 520 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 PFKPQ01813 784 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 SLC12A1Q13621 1099 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 DPYSL3Q14195 570 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 DHCR24Q15392 516 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 CA9Q16790 459 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 GAB4Q2WGN9 574 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 RABGAP1LQ5R372 815 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 SLC9A4Q6AI14 798 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 SCYL2Q6P3W7 929 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 LRRC31Q6UY01 552 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 SETD3Q86TU7 594 aaPredicted RBP11.63□□□□□ -0.55
MSH5-214ENST00000468602 SUGP1Q8IWZ8 645 aaKnown RBP11.63□□□□□ -0.55
MSH5-214ENST00000468602 ETFBKMTQ8IXQ9 262 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 LZTR1Q8N653 840 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 HJURPQ8NCD3 748 aaPredicted RBP11.63□□□□□ -0.55
MSH5-214ENST00000468602 ALG3Q92685 438 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 TBC1D31Q96DN5 1066 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 TMA16Q96EY4 203 aaKnown RBP11.63□□□□□ -0.55
MSH5-214ENST00000468602 LMLNQ96KR4 655 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 PRICKLE1Q96MT3 831 aaPredicted RBP11.63□□□□□ -0.55
MSH5-214ENST00000468602 KCTD15Q96SI1 283 aaPredicted RBP11.63□□□□□ -0.55
MSH5-214ENST00000468602 RPP25Q9BUL9 199 aaKnown RBP11.63□□□□□ -0.55
MSH5-214ENST00000468602 LINC00597Q9H2U6 94 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 GOLPH3Q9H4A6 298 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 ECT2Q9H8V3 914 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 ZWILCHQ9H900 591 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 CWC15Q9P013 229 aaKnown RBP11.63□□□□□ -0.55
MSH5-214ENST00000468602 PCSK1NQ9UHG2 260 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 SLC27A6Q9Y2P4 619 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 BDP1A6H8Y1 2624 aa11.63□□□□□ -0.55
MSH5-214ENST00000468602 COL4A3Q01955 1670 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 FAM72CH0Y354 149 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 DCLK1O15075 740 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 ZNF500O60304 480 aaPredicted RBP11.62□□□□□ -0.55
MSH5-214ENST00000468602 ADH1CP00326 375 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 CYP17A1P05093 508 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 SRFP11831 508 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms