RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 C10orf76Q5T2E6 689 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 MPP7Q5T2T1 576 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 PIK3R6Q5UE93 754 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 HEATR6Q6AI08 1181 aaKnown RBP11.59□□□□□ -0.55
COL4A6-205ENST00000468338 SLC26A9Q7LBE3 791 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 TAC4Q86UU9 113 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 ZNF677Q86XU0 584 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 CCDC33Q8N5R6 958 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 TXNDC5Q8NBS9 432 aaKnown RBP11.59□□□□□ -0.55
COL4A6-205ENST00000468338 TMEM35BQ8NCS4 154 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 GAB3Q8WWW8 586 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 RUBCNQ92622 972 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 HHIPQ96QV1 700 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 GABRG3Q99928 467 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 FAM207AQ9NSI2 230 aaPredicted RBP11.59□□□□□ -0.55
COL4A6-205ENST00000468338 NOCTQ9UK39 431 aaKnown RBP11.59□□□□□ -0.55
COL4A6-205ENST00000468338 SMG5Q9UPR3 1016 aaKnown RBP11.59□□□□□ -0.55
COL4A6-205ENST00000468338 CEP83Q9Y592 693 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 GON4LQ3T8J9 2241 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 SMTNL1A8MU46 457 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 AXIN1O15169 862 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 ACSL4O60488 711 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 HSF2BPO75031 334 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 KLF8O95600 359 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-205ENST00000468338 LSM8O95777 96 aaKnown RBP11.58□□□□□ -0.56
COL4A6-205ENST00000468338 TRUB2O95900 331 aaKnown RBP11.58□□□□□ -0.56
COL4A6-205ENST00000468338 CYBBP04839 570 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 CDK11BP21127 795 aaKnown RBP11.58□□□□□ -0.56
COL4A6-205ENST00000468338 TGM1P22735 817 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 SLC6A4P31645 630 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 PXNP49023 591 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-205ENST00000468338 ZNF165P49910 485 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 SNX16P57768 344 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 PITX1P78337 314 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-205ENST00000468338 SLC6A3Q01959 620 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 UBXN1Q04323 297 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 SRSF5Q13243 272 aaKnown RBP11.58□□□□□ -0.56
COL4A6-205ENST00000468338 ENPP2Q13822 863 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 SIM2Q14190 667 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-205ENST00000468338 GEN1Q17RS7 908 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 EOGTQ5NDL2 527 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 NADSYN1Q6IA69 706 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 FAM183BPQ6ZVS7 135 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 TRMT11Q7Z4G4 463 aaKnown RBP11.58□□□□□ -0.56
COL4A6-205ENST00000468338 KIAA0907Q7Z7F0 614 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-205ENST00000468338 ZDHHC17Q8IUH5 632 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.58□□□□□ -0.56
COL4A6-205ENST00000468338 ZNF513Q8N8E2 541 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-205ENST00000468338 OLIG1Q8TAK6 271 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 BHMTQ93088 406 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 NT5C3BQ969T7 300 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 TMA16Q96EY4 203 aaKnown RBP11.58□□□□□ -0.56
COL4A6-205ENST00000468338 KRTAP3-3Q9BYR6 98 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 KRTAP3-2Q9BYR7 98 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 CEP250Q9BV73 2442 aa11.58□□□□□ -0.56
COL4A6-205ENST00000468338 PLXND1Q9Y4D7 1925 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 A0A1W2PQF6 199 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 KCNU1A8MYU2 1149 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 CAPN9O14815 690 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 GFPT2O94808 682 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 CYP1A1P04798 512 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-205ENST00000468338 MMEP08473 750 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 CHRNB2P17787 502 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 PTMSP20962 102 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 VARSP26640 1264 aaKnown RBP11.57□□□□□ -0.56
COL4A6-205ENST00000468338 HLA-FP30511 346 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 NTSR1P30989 418 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 SLC11A2P49281 568 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 NOMO3P69849 1222 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 FMO1Q01740 532 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 CDR2Q01850 454 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 EIF4HQ15056 248 aaKnown RBP11.57□□□□□ -0.56
COL4A6-205ENST00000468338 DCAF6Q58WW2 860 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 EGFLAMQ63HQ2 1017 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 TMEM215Q68D42 235 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 LAIR1Q6GTX8 287 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 OR6B2Q6IFH4 312 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 DEFB106AQ8N104 65 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 MDGA1Q8NFP4 955 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 TSTD1Q8NFU3 115 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 IPO4Q8TEX9 1081 aaKnown RBP11.57□□□□□ -0.56
COL4A6-205ENST00000468338 DDI1Q8WTU0 396 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 C18orf8Q96DM3 657 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 ZC3H10Q96K80 434 aaKnown RBP11.57□□□□□ -0.56
COL4A6-205ENST00000468338 LMLNQ96KR4 655 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 ACOX2Q99424 681 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 ZDHHC4Q9NPG8 344 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 NLRC4Q9NPP4 1024 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.57□□□□□ -0.56
COL4A6-205ENST00000468338 CFAP54Q96N23 3096 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 CKAP5Q14008 2032 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 RALGAPA1Q6GYQ0 2036 aa11.57□□□□□ -0.56
COL4A6-205ENST00000468338 SPTBN4Q9H254 2564 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 GOLGA6L7A0A1B0GV03 622 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 NPC1O15118 1278 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 TEX33O43247 280 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 TIMM44O43615 452 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 ICMTO60725 284 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 DAB1O75553 588 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 RPP40O75818 363 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms