RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 USP27XA6NNY8 438 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 MIF4GDA9UHW6 222 aaKnown RBP15.71■□□□□ 0.11
SNIP1-202ENST00000468040 E9PAM4 449 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 GFRA2O00451 464 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 HOXC11O43248 304 aaPredicted RBP15.71■□□□□ 0.11
SNIP1-202ENST00000468040 CYP17A1P05093 508 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 GJC1P36383 396 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 VCPP55072 806 aaKnown RBP15.71■□□□□ 0.11
SNIP1-202ENST00000468040 GAD2Q05329 585 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 ITPRIPL2Q3MIP1 535 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 ODF2Q5BJF6 829 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 LY6G5CQ5SRR4 150 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 ZFYVE27Q5T4F4 411 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 TXNRD3NBQ6F5E7 133 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 FBXL22Q6P050 247 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 RFWD3Q6PCD5 774 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 RHBDF2Q6PJF5 856 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 TPGS1Q6ZTW0 290 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 NT5DC3Q86UY8 548 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 TMEM25Q86YD3 366 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 DDI1Q8WTU0 396 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 CD101Q93033 1021 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 TMA16Q96EY4 203 aaKnown RBP15.71■□□□□ 0.11
SNIP1-202ENST00000468040 PRICKLE1Q96MT3 831 aaPredicted RBP15.71■□□□□ 0.11
SNIP1-202ENST00000468040 RPRD1AQ96P16 312 aaPredicted RBP15.71■□□□□ 0.11
SNIP1-202ENST00000468040 BBS2Q9BXC9 721 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 HPS4Q9NQG7 708 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 GPATCH2LQ9NWQ4 482 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 ZKSCAN5Q9Y2L8 839 aa15.71■□□□□ 0.11
SNIP1-202ENST00000468040 TCF20Q9UGU0 1960 aaKnown RBP15.7■□□□□ 0.1
SNIP1-202ENST00000468040 IGLV3-10A0A075B6K4 115 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 SRGAP2O75044 1071 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 LRIG2O94898 1065 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 FTCDO95954 541 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 PENKP01210 267 aaPredicted RBP15.7■□□□□ 0.1
SNIP1-202ENST00000468040 ADH5P11766 374 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 TNNT1P13805 278 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 CTNNA2P26232 953 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 CTNNA1P35221 906 aaKnown RBP15.7■□□□□ 0.1
SNIP1-202ENST00000468040 GGCXP38435 758 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 AMPD2Q01433 879 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 TNK2Q07912 1038 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 SEMA3BQ13214 749 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 KRT81Q14533 505 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 PDK2Q15119 407 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 ANO4Q32M45 955 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 C5orf22Q49AR2 442 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 PPP6R3Q5H9R7 873 aaPredicted RBP15.7■□□□□ 0.1
SNIP1-202ENST00000468040 MANEALQ5VSG8 457 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 MAP7D3Q8IWC1 876 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 ZNF683Q8IZ20 524 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 KCTD6Q8NC69 237 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 RETREG1Q9H6L5 497 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 GTSE1Q9NYZ3 720 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 RCOR3Q9P2K3 495 aaPredicted RBP15.7■□□□□ 0.1
SNIP1-202ENST00000468040 PPARGC1AQ9UBK2 798 aaKnown RBP15.7■□□□□ 0.1
SNIP1-202ENST00000468040 SNX10Q9Y5X0 201 aa15.7■□□□□ 0.1
SNIP1-202ENST00000468040 SPTBN5Q9NRC6 3674 aaKnown RBP15.7■□□□□ 0.1
SNIP1-202ENST00000468040 DRGXA6NNA5 263 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 NEDD8-MDP1E9PL57 170 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 H3BRJ5 948 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 EEF2KO00418 725 aaKnown RBP15.69■□□□□ 0.1
SNIP1-202ENST00000468040 TRDMT1O14717 391 aaKnown RBP15.69■□□□□ 0.1
SNIP1-202ENST00000468040 CREB3O43889 395 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 TSPAN3O60637 253 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 TYRP14679 529 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 ARL4AP40617 200 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 CDH6P55285 790 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 TPI1P60174 286 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 CA9Q16790 459 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 FYB2Q5VWT5 728 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 C14orf80Q86SX3 495 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 VSIG1Q86XK7 387 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 CCDC117Q8IWD4 279 aaPredicted RBP15.69■□□□□ 0.1
SNIP1-202ENST00000468040 UBALD2Q8IYN6 164 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 KATNAL2Q8IYT4 538 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 PYROXD2Q8N2H3 581 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 UBL4BQ8N7F7 174 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 ZNF557Q8N988 423 aaPredicted RBP15.69■□□□□ 0.1
SNIP1-202ENST00000468040 FAM71BQ8TC56 605 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 IGSF8Q969P0 613 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 TBC1D31Q96DN5 1066 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 MSANTD3Q96H12 275 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 KCTD15Q96SI1 283 aaPredicted RBP15.69■□□□□ 0.1
SNIP1-202ENST00000468040 ZYG11BQ9C0D3 744 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 DONSONQ9NYP3 566 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 STIM2Q9P246 746 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 PCDHA3Q9Y5H8 950 aa15.69■□□□□ 0.1
SNIP1-202ENST00000468040 A0A1B0GVM2 712 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 LRRD1A4D1F6 860 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 TCAF2A6NFQ2 919 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 OTOL1A6NHN0 477 aaPredicted RBP15.68■□□□□ 0.1
SNIP1-202ENST00000468040 FAM72CH0Y354 149 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 FGF10O15520 208 aaPredicted RBP15.68■□□□□ 0.1
SNIP1-202ENST00000468040 NARSO43776 548 aaKnown RBP15.68■□□□□ 0.1
SNIP1-202ENST00000468040 CACNG3O60359 315 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 TBL1XO60907 577 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 CLDN11O75508 207 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 KRT1P04264 644 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 GLULP15104 373 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms