RNA–Protein interactions for RNA: ENST00000466939.1

LAMP3-202, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LAMP3, Length 1,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-202ENST00000466939 HP1BP3Q5SSJ5 553 aaPredicted RBP12.54□□□□□ -0.4
LAMP3-202ENST00000466939 DDX53Q86TM3 631 aaKnown RBP12.54□□□□□ -0.4
LAMP3-202ENST00000466939 ZBED8Q8IZ13 594 aa12.54□□□□□ -0.4
LAMP3-202ENST00000466939 PDIK1LQ8N165 341 aa12.54□□□□□ -0.4
LAMP3-202ENST00000466939 EPS8L3Q8TE67 593 aaKnown RBP12.54□□□□□ -0.4
LAMP3-202ENST00000466939 FCRL2Q96LA5 508 aaPredicted RBP12.54□□□□□ -0.4
LAMP3-202ENST00000466939 CEP295NLQ96MC4 621 aa12.54□□□□□ -0.4
LAMP3-202ENST00000466939 SPATA13Q96N96 652 aa12.54□□□□□ -0.4
LAMP3-202ENST00000466939 CLSTN3Q9BQT9 956 aa12.54□□□□□ -0.4
LAMP3-202ENST00000466939 CCDC77Q9BR77 488 aa12.54□□□□□ -0.4
LAMP3-202ENST00000466939 PHACTR1Q9C0D0 580 aa12.54□□□□□ -0.4
LAMP3-202ENST00000466939 PRDM12Q9H4Q4 367 aa12.54□□□□□ -0.4
LAMP3-202ENST00000466939 VPS37BQ9H9H4 285 aa12.54□□□□□ -0.4
LAMP3-202ENST00000466939 CYP4F11Q9HBI6 524 aa12.54□□□□□ -0.4
LAMP3-202ENST00000466939 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.54□□□□□ -0.4
LAMP3-202ENST00000466939 TLR6Q9Y2C9 796 aa12.54□□□□□ -0.4
LAMP3-202ENST00000466939 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.54□□□□□ -0.4
LAMP3-202ENST00000466939 TCRBV7S3A2A0A539 114 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 SLC12A8A0AV02 714 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 E7EVH7 732 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 RNF103O00237 685 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 RASGRF2O14827 1237 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 NCAM2O15394 837 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 RGS16O15492 202 aaPredicted RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 FGF10O15520 208 aaPredicted RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 FGBP02675 491 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 DNAJB2P25686 324 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 LMAN1P49257 510 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 FPGSQ05932 587 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 TRIP4Q15650 581 aaPredicted RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 TAF12Q16514 161 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 DNAJC21Q5F1R6 531 aaKnown RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 FAM182AQ5T1J6 154 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 SYCP2LQ5T4T6 812 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 RASIP1Q5U651 963 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 TPGS2Q68CL5 300 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 MIB1Q86YT6 1006 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ANKMY2Q8IV38 441 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 CCDC13Q8IYE1 715 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 FIBCD1Q8N539 461 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 NPWQ8N729 165 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ATP6V0D2Q8N8Y2 350 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 P2RY11Q96G91 374 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ZNF512Q96ME7 567 aaPredicted RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 CDK5RAP1Q96SZ6 601 aaKnown RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ZBED2Q9BTP6 218 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 TMEM109Q9BVC6 243 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 TTLL2Q9BWV7 592 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 BRD8Q9H0E9 1235 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 CATSPERBQ9H7T0 1116 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ETNK1Q9HBU6 452 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 MARCH2Q9P0N8 246 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 SLC12A6Q9UHW9 1150 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ADAM21Q9UKJ8 722 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 YIPF1Q9Y548 306 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 PCDHB12Q9Y5F1 795 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 A0A087WUV0 522 aaPredicted RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 KCNU1A8MYU2 1149 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ALOX15BO15296 676 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 OPHN1O60890 802 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 BANF1O75531 89 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 SEC24AO95486 1093 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 TBX18O95935 607 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 HMBSP08397 361 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ABHD2P08910 425 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 NR1D1P20393 614 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ELF1P32519 619 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 FDFT1P37268 417 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 SLCO1A2P46721 670 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ALDH1A3P47895 512 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 COG7P83436 770 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 GALNT2Q10471 571 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 FASTKD3Q14CZ7 662 aaKnown RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 VEPH1Q14D04 833 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ANKRD20A2Q5SQ80 823 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 FNBP1LQ5T0N5 605 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 C6orf118Q5T5N4 469 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ANKRD20A1Q5TYW2 823 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ANKRD20A3Q5VUR7 823 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 CAPN12Q6ZSI9 719 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 TADA2BQ86TJ2 420 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 PDZD8Q8NEN9 1154 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ZNF461Q8TAF7 563 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 BADQ92934 168 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 EXOC4Q96A65 974 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 CELF6Q96J87 481 aaKnown RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 FRMD8Q9BZ67 464 aaPredicted RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ROPN1BQ9BZX4 212 aaPredicted RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 UBE2OQ9C0C9 1292 aaKnown RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 NACA2Q9H009 215 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 STMN4Q9H169 189 aaPredicted RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 ROPN1Q9HAT0 212 aaPredicted RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 LRRC4CQ9HCJ2 640 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 MRPL17Q9NRX2 175 aaKnown RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 NOVA2Q9UNW9 492 aaKnown RBP12.53□□□□□ -0.4
LAMP3-202ENST00000466939 NR2E3Q9Y5X4 410 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 HS3ST4Q9Y661 456 aa12.53□□□□□ -0.4
LAMP3-202ENST00000466939 E9PAM4 449 aa12.52□□□□□ -0.41
LAMP3-202ENST00000466939 F5H423 210 aaPredicted RBP12.52□□□□□ -0.41
LAMP3-202ENST00000466939 PRRG1O14668 218 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms