RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 KLF10Q13118 480 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 MXD4Q14582 209 aaPredicted RBP13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 LRRC23Q53EV4 343 aaPredicted RBP13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 LCLAT1Q6UWP7 414 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 ISLR2Q6UXK2 745 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 TRIM50Q86XT4 487 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 C12orf29Q8N999 325 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 ZNF280CQ8ND82 737 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 PRICKLE1Q96MT3 831 aaPredicted RBP13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 QKIQ96PU8 341 aaKnown RBP eCLIP13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 GCOM2Q9BZD3 368 aaPredicted RBP13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 INO80BQ9C086 356 aaPredicted RBP13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 MIS12Q9H081 205 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 MINDY3Q9H8M7 445 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 ATXN10Q9UBB4 475 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 PTPRFP10586 1907 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 E9PBE3 544 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 VILLO15195 856 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 KLHL41O60662 606 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 GABBR2O75899 941 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 FBXO21O94952 628 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 IL18RAPO95256 599 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 TFAP2AP05549 437 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 SDC4P31431 198 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 ATXN1P54253 815 aaKnown RBP13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 SLC9B1Q4ZJI4 515 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 FAM160B1Q5W0V3 765 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 PMF1Q6P1K2 205 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 MARVELD2Q8N4S9 558 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 MAPK15Q8TD08 544 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 ATP2A3Q93084 1043 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 DCUN1D1Q96GG9 259 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 FAM96AQ9H5X1 160 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 COG4Q9H9E3 785 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 CYP3A43Q9HB55 503 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 ARHGAP26Q9UNA1 814 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 PHF24Q9UPV7 400 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 DENRO43583 198 aaKnown RBP13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 CREB3O43889 395 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 PEX10O60683 326 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 DNAJA2O60884 412 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 IQCF3P0C7M6 154 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 MGAT1P26572 445 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 PRDX6P30041 224 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 SESN2P58004 480 aaPredicted RBP13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 R3HDM1Q15032 1099 aaKnown RBP13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 TMEM132AQ24JP5 1023 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 EPGNQ6UW88 154 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 PQLC1Q8N2U9 271 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 ZNF781Q8N8C0 355 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 MPP4Q96JB8 637 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 C2orf40Q9H1Z8 148 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 TRIP11Q15643 1979 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 SSC5DA1L4H1 1573 aa13.34□□□□□ -0.27
PDZRN3-205ENST00000466780 IGKV6-21A0A0C4DH24 114 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 ASLP04424 464 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 RANBP1P43487 201 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 GMPSP49915 693 aaPredicted RBP13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 INHBCP55103 352 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 INSCQ1MX18 579 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 GOLGA7BQ2TAP0 167 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 NAPRTQ6XQN6 538 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 CMC1Q7Z7K0 106 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 SCUBE3Q8IX30 993 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 PIP4K2CQ8TBX8 421 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 TRAPPC12Q8WVT3 735 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 DGCR14Q96DF8 476 aaKnown RBP13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 HIC2Q96JB3 615 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 KCNK16Q96T55 309 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 RTKNQ9BST9 563 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 VRTNQ9H8Y1 702 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 HESX1Q9UBX0 185 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 BARX2Q9UMQ3 279 aaPredicted RBP13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 PSMD13Q9UNM6 376 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 PCDHB12Q9Y5F1 795 aa13.33□□□□□ -0.27
PDZRN3-205ENST00000466780 PENKP01210 267 aaPredicted RBP13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 CPA3P15088 417 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 PTPRAP18433 802 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 PMLP29590 882 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 INCA1Q0VD86 236 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 HEATR6Q6AI08 1181 aaKnown RBP13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 TNS4Q8IZW8 715 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 PLD6Q8N2A8 252 aaKnown RBP13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 METTL25Q8N6Q8 603 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 DNERQ8NFT8 737 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 CDKL2Q92772 493 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 HPDLQ96IR7 371 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 PGLYRP2Q96PD5 576 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 LENG8Q96PV6 779 aaPredicted RBP13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 OR52B2Q96RD2 323 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 B3GNT5Q9BYG0 378 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 DHX35Q9H5Z1 703 aaKnown RBP13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 AS3MTQ9HBK9 375 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 IRAK4Q9NWZ3 460 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 DTLQ9NZJ0 730 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 NDUFA13Q9P0J0 144 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 SSX2IPQ9Y2D8 614 aa13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 TNS1Q9HBL0 1735 aaKnown RBP13.33□□□□□ -0.28
PDZRN3-205ENST00000466780 ZNF487B1APH4 448 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms