RNA–Protein interactions for RNA: ENST00000466451.1

SEC61A2-211, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 2

Gene SEC61A2, Length 427 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-211ENST00000466451 TBC1D3DA0A087WVF3 549 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 TBC1D3IA0A087WXS9 549 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 TBC1D3EA0A087X179 549 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 TBC1D3KA0A087X1G2 549 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 TBC1D3BA6NDS4 549 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 TBC1D3FA6NER0 549 aaPredicted RBP3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 KCNU1A8MYU2 1149 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 TBC1D3LB9A6J9 549 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 SMIM22K7EJ46 135 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 CTIFO43310 598 aaKnown RBP3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 TAF5LO75529 589 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 ALDOAP04075 364 aaKnown RBP3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 TBC1D3HP0C7X1 549 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 FPR3P25089 353 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 MT3P25713 68 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 KLRK1P26718 216 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 GRK5P34947 590 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 THBS4P35443 961 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 AARSP49588 968 aaKnown RBP eCLIP3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 PAPOLAP51003 745 aaKnown RBP3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 PSG6Q00889 435 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 GALNT1Q10472 559 aaPredicted RBP3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 SF3A3Q12874 501 aaKnown RBP eCLIP3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 GRM4Q14833 912 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 LARS2Q15031 903 aaKnown RBP3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 FAM187BQ17R55 369 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 PROSER3Q2NL68 480 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 INO80DQ53TQ3 878 aaPredicted RBP3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 ZNF628Q5EBL2 1059 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 FAM90A2PQ658T7 463 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 TBC1D3GQ6DHY5 549 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 TANGO2Q6ICL3 276 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 SULT6B1Q6IMI4 303 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 TBC1D3CQ6IPX1 549 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 GRHL2Q6ISB3 625 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 ACSM6Q6P461 480 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 TMEM88Q6PEY1 159 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 ANKRD18AQ8IVF6 992 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 UEVLDQ8IX04 471 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 TBC1D3Q8IZP1 549 aaPredicted RBP3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 NKAPQ8N5F7 415 aaKnown RBP3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 OR6Y1Q8NGX8 325 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 MAFAQ8NHW3 353 aaPredicted RBP3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 SLC22A17Q8WUG5 538 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 NSMCE1Q8WV22 266 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 GLMPQ8WWB7 406 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 AKAP1Q92667 903 aaKnown RBP eCLIP3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 GOLGA1Q92805 767 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 TRAPPC9Q96Q05 1148 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 LPAR3Q9UBY5 353 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 FZD4Q9ULV1 537 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 VPS4AQ9UN37 437 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 PROCRQ9UNN8 238 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 AFG3L2Q9Y4W6 797 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 SPATA31A1Q5TZJ5 1347 aa3.93□□□□□ -1.78
SEC61A2-211ENST00000466451 CUX2O14529 1486 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 KIF21AQ7Z4S6 1674 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 GXYLT2A0PJZ3 443 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 CLIC1O00299 241 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 FYB1O15117 783 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 SEPT4O43236 478 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 CBFA2T3O75081 653 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 PPP6R2O75170 966 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 RPP40O75818 363 aaKnown RBP3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 TUBB4AP04350 444 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 HSD3B1P14060 373 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 TACR3P29371 465 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 GALNSP34059 522 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 CDK7P50613 346 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 ARL4CP56559 192 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 WDR5P61964 334 aaKnown RBP3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 GPC5P78333 572 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 DEUP1Q05D60 604 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 TAF12Q16514 161 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 BTBD16Q32M84 506 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 RNASE12Q5GAN4 147 aaKnown RBP3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 PRAMEF17Q5VTA0 474 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 MSANTD2Q6P1R3 559 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 PIK3AP1Q6ZUJ8 805 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 BCDIN3DQ7Z5W3 292 aaKnown RBP3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 PNLDC1Q8NA58 520 aaKnown RBP3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 OTUD7AQ8TE49 926 aaPredicted RBP3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 SDCCAG3Q96C92 435 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 ZSCAN31Q96LW9 406 aaPredicted RBP3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 ASB2Q96Q27 587 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 SENP7Q9BQF6 1050 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 TMEM79Q9BSE2 394 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 SORBS1Q9BX66 1292 aaKnown RBP3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 PRSS22Q9GZN4 317 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 TAF1DQ9H5J8 278 aaPredicted RBP3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 PRDM16Q9HAZ2 1276 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 PRDM8Q9NQV8 689 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 ABHD10Q9NUJ1 306 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 GAR1Q9NY12 217 aaKnown RBP3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 GRHPRQ9UBQ7 328 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 ERCC6Q03468 1493 aa3.92□□□□□ -1.78
SEC61A2-211ENST00000466451 MBD3L5A6NJ08 208 aaPredicted RBP3.91□□□□□ -1.78
SEC61A2-211ENST00000466451 KIF28PB7ZC32 967 aa3.91□□□□□ -1.78
SEC61A2-211ENST00000466451 NKX2-8O15522 239 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms