RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 H0YHG0 523 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 RIPK2O43353 540 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 SHBGP04278 402 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 L1CAMP32004 1257 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 CAV1Q03135 178 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 IFT88Q13099 833 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 KLF1Q13351 362 aaPredicted RBP19.24■□□□□ 0.67
CAPN3-209ENST00000466222 DPYSL3Q14195 570 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 BEND5Q7L4P6 421 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 TDHQ8IZJ6 230 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 HS6ST3Q8IZP7 471 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 GRK7Q8WTQ7 553 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 C1orf54Q8WWF1 131 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 PSMG2Q969U7 264 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 HAUS1Q96CS2 278 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 SEC16BQ96JE7 1060 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 CABS1Q96KC9 395 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 KCTD15Q96SI1 283 aaPredicted RBP19.24■□□□□ 0.67
CAPN3-209ENST00000466222 TKTL2Q9H0I9 626 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 SMOC2Q9H3U7 446 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 CCDC134Q9H6E4 229 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 WDCPQ9H6R7 721 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 XPO7Q9UIA9 1087 aaKnown RBP19.24■□□□□ 0.67
CAPN3-209ENST00000466222 CCL16O15467 120 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 IRAK2O43187 625 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 TLR5O60602 858 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 CLASP2O75122 1294 aaKnown RBP19.23■□□□□ 0.67
CAPN3-209ENST00000466222 ADRA1BP35368 520 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 CXCR3P49682 368 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 EPHB3P54753 998 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 VEPH1Q14D04 833 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 TNFAIP8L3Q5GJ75 292 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 TFDP3Q5H9I0 405 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 C10orf120Q5SQS8 335 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 ICE2Q659A1 982 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 TAOK1Q7L7X3 1001 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 RNF34Q969K3 372 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 MYRFLQ96LU7 910 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 HOMER3Q9NSC5 361 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 CLIC5Q9NZA1 410 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 PTPRDP23468 1912 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 GOLGA6L7A0A1B0GV03 622 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 C2orf78A6NCI8 922 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 ITIH2P19823 946 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 DRD4P21917 467 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 KRT81Q14533 505 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 ZNF697Q5TEC3 545 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 CHRDL2Q6WN34 429 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 CPLX4Q7Z7G2 160 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 ARHGAP18Q8N392 663 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 TEKT4Q8WW24 435 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 SAMD11Q96NU1 681 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 MAN1C1Q9NR34 630 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 HCFC1R1Q9NWW0 138 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 PLXNA4Q9HCM2 1894 aa19.23■□□□□ 0.67
CAPN3-209ENST00000466222 C5orf42Q9H799 3197 aa19.22■□□□□ 0.67
CAPN3-209ENST00000466222 HMBSP08397 361 aa19.22■□□□□ 0.67
CAPN3-209ENST00000466222 PPP1R7Q15435 360 aa19.22■□□□□ 0.67
CAPN3-209ENST00000466222 LACTB2Q53H82 288 aaPredicted RBP19.22■□□□□ 0.67
CAPN3-209ENST00000466222 SEMA4AQ9H3S1 761 aa19.22■□□□□ 0.67
CAPN3-209ENST00000466222 COMMD8Q9NX08 183 aa19.22■□□□□ 0.67
CAPN3-209ENST00000466222 RRN3Q9NYV6 651 aa19.22■□□□□ 0.67
CAPN3-209ENST00000466222 RASGRF2O14827 1237 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 LPXNO60711 386 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 LRG1P02750 347 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 GOT1P17174 413 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 GJA1P17302 382 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 ATP5DP30049 168 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 KCNJ1P48048 391 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 SNX1Q13596 522 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 PTK6Q13882 451 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 DPYSL2Q16555 572 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 TAZQ16635 292 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 FAM182AQ5T1J6 154 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 CEP295NLQ96MC4 621 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 CYP2S1Q96SQ9 504 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 TRIM62Q9BVG3 475 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 RNF38Q9H0F5 515 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 IL21Q9HBE4 155 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 MFHAS1Q9Y4C4 1052 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 CREB3O43889 395 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 CST8O60676 142 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 MOCS2O96007 188 aaPredicted RBP19.21■□□□□ 0.67
CAPN3-209ENST00000466222 F9P00740 461 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 CHN1P15882 459 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 BMP8BP34820 402 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 RAB30Q15771 203 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 QPCTQ16769 361 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 NETO2Q8NC67 525 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 PCDH19Q8TAB3 1148 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 TRMT2BQ96GJ1 504 aaKnown RBP19.21■□□□□ 0.67
CAPN3-209ENST00000466222 MARCH2Q9P0N8 246 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 MAFFQ9ULX9 164 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 HCFC2Q9Y5Z7 792 aa19.21■□□□□ 0.67
CAPN3-209ENST00000466222 COCHO43405 550 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 MAP3K6O95382 1288 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 GAS8O95995 478 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 F11P03951 625 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 HNRNPH1P31943 449 aaKnown RBP19.2■□□□□ 0.66
CAPN3-209ENST00000466222 PSEN1P49768 467 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms