RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 B4GALT3O60512 393 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 GJB5O95377 273 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 RB1P06400 928 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 GLI1P08151 1106 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 PDGFRBP09619 1106 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 CD19P15391 556 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 IGFBP6P24592 240 aaPredicted RBP5.76□□□□□ -1.49
VPS41-211ENST00000466017 SLC1A1P43005 524 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 BRCC3P46736 316 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 RAP1GAPP47736 663 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 GIPRP48546 466 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 SLC11A1P49279 550 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 ALDH7A1P49419 539 aaKnown RBP5.76□□□□□ -1.49
VPS41-211ENST00000466017 BCAT1P54687 386 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 BCAR1P56945 870 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 GNG11P61952 73 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 YWHAHQ04917 246 aaPredicted RBP5.76□□□□□ -1.49
VPS41-211ENST00000466017 BST2Q10589 180 aaKnown RBP5.76□□□□□ -1.49
VPS41-211ENST00000466017 KCNMB1Q16558 191 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 NFE2Q16621 373 aaPredicted RBP5.76□□□□□ -1.49
VPS41-211ENST00000466017 MLANAQ16655 118 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 CFAP221Q4G0U5 840 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 LCE3BQ5TA77 95 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 LIN9Q5TKA1 542 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 TAF3Q5VWG9 929 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 PAPD7Q5XG87 772 aaKnown RBP5.76□□□□□ -1.49
VPS41-211ENST00000466017 FUT10Q6P4F1 479 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 KCNT2Q6UVM3 1135 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 VSTM1Q6UX27 236 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 SCARA5Q6ZMJ2 495 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 ANKS3Q6ZW76 656 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 BEND5Q7L4P6 421 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 ACOT1Q86TX2 421 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 PALB2Q86YC2 1186 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 DCP1BQ8IZD4 617 aaKnown RBP5.76□□□□□ -1.49
VPS41-211ENST00000466017 SLC39A11Q8N1S5 342 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 LRRC57Q8N9N7 239 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 C3orf20Q8ND61 904 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 C1orf131Q8NDD1 294 aaKnown RBP5.76□□□□□ -1.49
VPS41-211ENST00000466017 TMEM52Q8NDY8 209 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 SLC35G2Q8TBE7 412 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 FEZF2Q8TBJ5 459 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 MYCBPAPQ8TBZ2 947 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 C2orf15Q8WU43 125 aaKnown RBP5.76□□□□□ -1.49
VPS41-211ENST00000466017 BADQ92934 168 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 C18orf8Q96DM3 657 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 MCRS1Q96EZ8 462 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 ABHD8Q96I13 439 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 IGSF21Q96ID5 467 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 RAD9AQ99638 391 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 RTP3Q9BQQ7 232 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 SYT15Q9BQS2 421 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 DUSP16Q9BY84 665 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 MKRN2Q9H000 416 aaKnown RBP5.76□□□□□ -1.49
VPS41-211ENST00000466017 RNF32Q9H0A6 362 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 ZCWPW1Q9H0M4 648 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 THAP2Q9H0W7 228 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 LZTFL1Q9NQ48 299 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 RRAGDQ9NQL2 400 aaPredicted RBP5.76□□□□□ -1.49
VPS41-211ENST00000466017 PARVAQ9NVD7 372 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 ASNSD1Q9NWL6 643 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 COMMD8Q9NX08 183 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 MARCH5Q9NX47 278 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 HESX1Q9UBX0 185 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 DNAJB4Q9UDY4 337 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 CNOT8Q9UFF9 292 aaKnown RBP5.76□□□□□ -1.49
VPS41-211ENST00000466017 TSPAN16Q9UKR8 245 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 GUCA1BQ9UMX6 200 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 SSX2IPQ9Y2D8 614 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 ZNF451Q9Y4E5 1061 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 DUSP10Q9Y6W6 482 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 MYH10P35580 1976 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 COL4A6Q14031 1691 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 SF3B1O75533 1304 aaKnown RBP eCLIP5.75□□□□□ -1.49
VPS41-211ENST00000466017 HTTP42858 3142 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 A0A0U1RQJ8 604 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 A0A1W2PQH9 124 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 TMEM191CA6NGB0 347 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 SIGLEC6O43699 453 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 SOD2P04179 222 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 KRT1P04264 644 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 ERBB2P04626 1255 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 ITGB1P05556 798 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 C8AP07357 584 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 SYPP08247 313 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 LINC00271P0C7V0 271 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 TCP1P17987 556 aaKnown RBP5.75□□□□□ -1.49
VPS41-211ENST00000466017 RRM1P23921 792 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 RPL10P27635 214 aaKnown RBP5.75□□□□□ -1.49
VPS41-211ENST00000466017 CASQ1P31415 396 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 MAN1A1P33908 653 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 PPM1AP35813 382 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 CCNFP41002 786 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 MAGEA11P43364 429 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 SLC8A3P57103 927 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 TUBB4BP68371 445 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 TSPY1Q01534 308 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 UBE3AQ05086 875 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 GPR17Q13304 367 aa5.75□□□□□ -1.49
VPS41-211ENST00000466017 MAMLD1Q13495 774 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms