RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 SPRP35270 261 aaPredicted RBP9.69□□□□□ -0.86
SCAF11-205ENST00000465950 SEC23AQ15436 765 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 GJD3Q8N144 294 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 C7orf43Q8WVR3 580 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 MCUR1Q96AQ8 359 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 MRPL38Q96DV4 380 aaKnown RBP9.69□□□□□ -0.86
SCAF11-205ENST00000465950 ZNF514Q96K75 400 aaPredicted RBP9.69□□□□□ -0.86
SCAF11-205ENST00000465950 CISHQ9NSE2 258 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 ROBO3Q96MS0 1386 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 SOWAHBA6NEL2 793 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 MAN1A2O60476 641 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 ZNF24P17028 368 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 EN2P19622 333 aaPredicted RBP9.69□□□□□ -0.86
SCAF11-205ENST00000465950 CASP2P42575 452 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 CDR2LQ86X02 465 aaPredicted RBP9.69□□□□□ -0.86
SCAF11-205ENST00000465950 BBS7Q8IWZ6 715 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 SRFBP1Q8NEF9 429 aaKnown RBP9.69□□□□□ -0.86
SCAF11-205ENST00000465950 NPLOC4Q8TAT6 608 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 KLHDC7BQ96G42 594 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 CDT1Q9H211 546 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 GOLPH3Q9H4A6 298 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 LRRC40Q9H9A6 602 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 PLIN4Q96Q06 1357 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 NT5C1B-RDH14C9J2C7 533 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 EIF4A3P38919 411 aaKnown RBP9.69□□□□□ -0.86
SCAF11-205ENST00000465950 YBEYP58557 167 aaPredicted RBP9.69□□□□□ -0.86
SCAF11-205ENST00000465950 DCLK2Q8N568 766 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 GPR156Q8NFN8 814 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 LRRC8CQ8TDW0 803 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 SLC22A18Q96BI1 424 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 HEPHQ9BQS7 1158 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 ROGDIQ9GZN7 287 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 NDE1Q9NXR1 346 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 CDH7Q9ULB5 785 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 HBQ1P09105 142 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 NR2C2P49116 596 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 CSTF1Q05048 431 aaKnown RBP9.69□□□□□ -0.86
SCAF11-205ENST00000465950 ENPEPQ07075 957 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 HDXQ7Z353 690 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 DENND1CQ8IV53 801 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 SLC2A14Q8TDB8 520 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 FAM3CQ92520 227 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 LPPQ93052 612 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 FAIM2Q9BWQ8 316 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 ADAMTS10Q9H324 1103 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 RETREG1Q9H6L5 497 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 METTL5Q9NRN9 209 aaKnown RBP9.69□□□□□ -0.86
SCAF11-205ENST00000465950 CALCOCO1Q9P1Z2 691 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 ZNHIT2Q9UHR6 403 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 RAPGEFL1Q9UHV5 662 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 INTUQ9ULD6 942 aa9.69□□□□□ -0.86
SCAF11-205ENST00000465950 TOPAZ1Q8N9V7 1692 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 SOBPA7XYQ1 873 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 NDUFAB1O14561 156 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 AXIN1O15169 862 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 HSPA4LO95757 839 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 CHRNA1P02708 482 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 CA3P07451 260 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 ARHGAP8P85298 464 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 GCNT1Q02742 428 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 TDGQ13569 410 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 TOB2Q14106 344 aaPredicted RBP9.68□□□□□ -0.86
SCAF11-205ENST00000465950 ATAD3BQ5T9A4 648 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 FAM173BQ6P4H8 233 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 ANKRD52Q8NB46 1076 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 LPCAT1Q8NF37 534 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 WNT8BQ93098 351 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 EMID1Q96A84 441 aaPredicted RBP9.68□□□□□ -0.86
SCAF11-205ENST00000465950 SERAC1Q96JX3 654 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 YIPF1Q9Y548 306 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 LMO7Q8WWI1 1683 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 ESPNB1AK53 854 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 GLRA2P23416 452 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 CNR2P34972 360 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 E2F1Q01094 437 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 ADIGQ0VDE8 80 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 LONRF1Q17RB8 773 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 KRT71Q3SY84 523 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 FSCBQ5H9T9 825 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 CAND1Q86VP6 1230 aaKnown RBP9.68□□□□□ -0.86
SCAF11-205ENST00000465950 STX19Q8N4C7 294 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 BLOC1S5Q8TDH9 187 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 IGSF21Q96ID5 467 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 EBNA1BP2Q99848 306 aaKnown RBP9.68□□□□□ -0.86
SCAF11-205ENST00000465950 SLC2A11Q9BYW1 496 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 GTPBP10A4D1E9 387 aaKnown RBP9.68□□□□□ -0.86
SCAF11-205ENST00000465950 OR5K4A6NMS3 321 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 H3BNH8 94 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 KCNN4O15554 427 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 ZBTB14O43829 449 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 RPA3P35244 121 aaPredicted RBP9.68□□□□□ -0.86
SCAF11-205ENST00000465950 PCSK7Q16549 785 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 CDC6Q99741 560 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 YY1AP1Q9H869 796 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 TDP1Q9NUW8 608 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 CHCHD3Q9NX63 227 aaKnown RBP9.68□□□□□ -0.86
SCAF11-205ENST00000465950 AP4E1Q9UPM8 1137 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 SETD1AO15047 1707 aaKnown RBP9.68□□□□□ -0.86
SCAF11-205ENST00000465950 COL16A1Q07092 1604 aaPredicted RBP9.68□□□□□ -0.86
SCAF11-205ENST00000465950 NRP1O14786 923 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms