RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRA2B-208ENST00000465245 TSC1Q92574 1164 aa12.54□□□□□ -0.4
TRA2B-208ENST00000465245 TMA16Q96EY4 203 aaKnown RBP12.54□□□□□ -0.4
TRA2B-208ENST00000465245 TMEM176AQ96HP8 235 aa12.54□□□□□ -0.4
TRA2B-208ENST00000465245 LGMNQ99538 433 aa12.54□□□□□ -0.4
TRA2B-208ENST00000465245 NIF3L1Q9GZT8 377 aa12.54□□□□□ -0.4
TRA2B-208ENST00000465245 RSPH9Q9H1X1 276 aaPredicted RBP12.54□□□□□ -0.4
TRA2B-208ENST00000465245 EBF2Q9HAK2 575 aa12.54□□□□□ -0.4
TRA2B-208ENST00000465245 APOBEC3GQ9HC16 384 aaKnown RBP12.54□□□□□ -0.4
TRA2B-208ENST00000465245 OLA1Q9NTK5 396 aaKnown RBP12.54□□□□□ -0.4
TRA2B-208ENST00000465245 DMAC2Q9NW81 257 aa12.54□□□□□ -0.4
TRA2B-208ENST00000465245 SERGEFQ9UGK8 458 aa12.54□□□□□ -0.4
TRA2B-208ENST00000465245 PVALEFA0A1B0GWK0 134 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 A0A1W2PP55 124 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 CAPN8A6NHC0 703 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 LRRC72A6NJI9 287 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 ERVH48-1M5A8F1 160 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 MID1O15344 667 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 POLR2DO15514 142 aaKnown RBP12.53□□□□□ -0.4
TRA2B-208ENST00000465245 PPP6R2O75170 966 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 NR3C1P04150 777 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 CD70P32970 193 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 AFMP43652 599 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 SGSHP51688 502 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 SFSWAPQ12872 951 aaKnown RBP12.53□□□□□ -0.4
TRA2B-208ENST00000465245 ILKQ13418 452 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 CUL4BQ13620 913 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 TBC1D25Q3MII6 688 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 TAF1BQ53T94 588 aaPredicted RBP12.53□□□□□ -0.4
TRA2B-208ENST00000465245 RAB41Q5JT25 222 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 CEP135Q66GS9 1140 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 PCSK4Q6UW60 755 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 PIGZQ86VD9 579 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 SPACA3Q8IXA5 215 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 OR2T34Q8NGX1 318 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 WFDC5Q8TCV5 224 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 HEXIM2Q96MH2 286 aaKnown RBP12.53□□□□□ -0.4
TRA2B-208ENST00000465245 MTG2Q9H4K7 406 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 ZSCAN16Q9H4T2 348 aaPredicted RBP12.53□□□□□ -0.4
TRA2B-208ENST00000465245 SFMBT1Q9UHJ3 866 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 FRMD4BQ9Y2L6 1034 aa12.53□□□□□ -0.4
TRA2B-208ENST00000465245 HBS1LQ9Y450 684 aaKnown RBP12.53□□□□□ -0.4
TRA2B-208ENST00000465245 DOCK9Q9BZ29 2069 aa12.52□□□□□ -0.4
TRA2B-208ENST00000465245 HECTD1Q9ULT8 2610 aa12.52□□□□□ -0.4
TRA2B-208ENST00000465245 A0A1W2PR77 199 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 CUTAO60888 179 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 SIN3BO75182 1162 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 RNASEH2AO75792 299 aaKnown RBP12.52□□□□□ -0.41
TRA2B-208ENST00000465245 LATS1O95835 1130 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 ZBED1O96006 694 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 GLDCP23378 1020 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 VAMP7P51809 220 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 TKTL1P51854 596 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 SLC8A3P57103 927 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 ST8SIA6P61647 398 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 CST6Q15828 149 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 C1orf220Q5T0J3 134 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 ADGRF1Q5T601 910 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 SHC4Q6S5L8 630 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 ERICH1Q86X53 443 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 OXR1Q8N573 874 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 KIAA0895Q8NCT3 520 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 CCDC150Q8NCX0 1101 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 RNF139Q8WU17 664 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 TMEM174Q8WUU8 243 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 NDRG1Q92597 394 aaKnown RBP12.52□□□□□ -0.41
TRA2B-208ENST00000465245 SERAC1Q96JX3 654 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 OMDQ99983 421 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 ULBP1Q9BZM6 244 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 UBXN6Q9BZV1 441 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 NEUROG2Q9H2A3 272 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 KCTD10Q9H3F6 313 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 STOML2Q9UJZ1 356 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 CLCA2Q9UQC9 943 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 MTMR6Q9Y217 621 aa12.52□□□□□ -0.41
TRA2B-208ENST00000465245 TDRD6O60522 2096 aaKnown RBP12.51□□□□□ -0.41
TRA2B-208ENST00000465245 PDXKO00764 312 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 WNT9AO14904 365 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 MSI1O43347 362 aaKnown RBP12.51□□□□□ -0.41
TRA2B-208ENST00000465245 TBL1XO60907 577 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 SLFN14P0C7P3 912 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 TRIM49P0CI25 452 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 TRIM49CP0CI26 452 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 CKMT2P17540 419 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 GCLMP48507 274 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 CCR5P51681 352 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 NXPH1P58417 271 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 KCNH2Q12809 1159 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 BNIP3Q12983 259 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 STK4Q13043 487 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 KCNJ12Q14500 433 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 HNRNPA1L2Q32P51 320 aaKnown RBP12.51□□□□□ -0.41
TRA2B-208ENST00000465245 SLC45A4Q5BKX6 768 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 SFMBT2Q5VUG0 894 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 PM20D1Q6GTS8 502 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 BHLHA9Q7RTU4 235 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 MMAAQ8IVH4 418 aaKnown RBP12.51□□□□□ -0.41
TRA2B-208ENST00000465245 DHX40Q8IX18 779 aaKnown RBP12.51□□□□□ -0.41
TRA2B-208ENST00000465245 GRAMD1CQ8IYS0 662 aa12.51□□□□□ -0.41
TRA2B-208ENST00000465245 TAS1R2Q8TE23 839 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms