RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 ZNF804AQ7Z570 1209 aa5.29□□□□□ -1.56
USP25-207ENST00000464435 LINS1Q8NG48 757 aa5.29□□□□□ -1.56
USP25-207ENST00000464435 SLC2A12Q8TD20 617 aa5.29□□□□□ -1.56
USP25-207ENST00000464435 HTRA1Q92743 480 aa5.29□□□□□ -1.56
USP25-207ENST00000464435 KTI12Q96EK9 354 aaPredicted RBP5.29□□□□□ -1.56
USP25-207ENST00000464435 ELOVL1Q9BW60 279 aa5.29□□□□□ -1.56
USP25-207ENST00000464435 PRDM16Q9HAZ2 1276 aa5.29□□□□□ -1.56
USP25-207ENST00000464435 ABHD10Q9NUJ1 306 aa5.29□□□□□ -1.56
USP25-207ENST00000464435 SLC12A4Q9UP95 1085 aa5.29□□□□□ -1.56
USP25-207ENST00000464435 PCDHA10Q9Y5I2 948 aa5.29□□□□□ -1.56
USP25-207ENST00000464435 AOX1Q06278 1338 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 MBD3L5A6NJ08 208 aaPredicted RBP5.28□□□□□ -1.56
USP25-207ENST00000464435 ZNF213O14771 459 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 HOXC11O43248 304 aaPredicted RBP5.28□□□□□ -1.56
USP25-207ENST00000464435 JTBO76095 146 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 APEHP13798 732 aaKnown RBP5.28□□□□□ -1.56
USP25-207ENST00000464435 MMP8P22894 467 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 GRK5P34947 590 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 RBM6P78332 1123 aaKnown RBP5.28□□□□□ -1.56
USP25-207ENST00000464435 TLE2Q04725 743 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 TBX2Q13207 712 aaPredicted RBP5.28□□□□□ -1.56
USP25-207ENST00000464435 CBFBQ13951 182 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 PCID2Q5JVF3 399 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 BBS12Q6ZW61 710 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 RASAL3Q86YV0 1011 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 SFTPA1Q8IWL2 248 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 LINC01465Q8N7H1 131 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 FAM71DQ8N9W8 422 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 SEMA6DQ8NFY4 1073 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 OR52L2PQ8NGH6 319 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 MAFAQ8NHW3 353 aaPredicted RBP5.28□□□□□ -1.56
USP25-207ENST00000464435 KAZALD1Q96I82 304 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 SNX18Q96RF0 628 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 CINPQ9BW66 212 aaPredicted RBP5.28□□□□□ -1.56
USP25-207ENST00000464435 CIPCQ9C0C6 399 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 UBN1Q9NPG3 1134 aa5.28□□□□□ -1.56
USP25-207ENST00000464435 TBC1D3DA0A087WVF3 549 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 TBC1D3IA0A087WXS9 549 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 TBC1D3EA0A087X179 549 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 TBC1D3KA0A087X1G2 549 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 VWA3AA6NCI4 1184 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 TBC1D3BA6NDS4 549 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 TBC1D3FA6NER0 549 aaPredicted RBP5.27□□□□□ -1.57
USP25-207ENST00000464435 A6NLC8 198 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 TBC1D3LB9A6J9 549 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 PRRT4C9JH25 899 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 EPB41L2O43491 1005 aaKnown RBP5.27□□□□□ -1.57
USP25-207ENST00000464435 KAT7O95251 611 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 TBC1D3HP0C7X1 549 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 MYCLP12524 364 aaPredicted RBP5.27□□□□□ -1.57
USP25-207ENST00000464435 ATP1A3P13637 1013 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 ACP5P13686 325 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 TNFAIP3P21580 790 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 MCM2P49736 904 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 JAK3P52333 1124 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 COPB1P53618 953 aaKnown RBP5.27□□□□□ -1.57
USP25-207ENST00000464435 RCAN1P53805 252 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 PROK1P58294 105 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 CHRNDQ07001 517 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 SLC10A2Q12908 348 aaPredicted RBP5.27□□□□□ -1.57
USP25-207ENST00000464435 GAB1Q13480 694 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 TRPC3Q13507 836 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 SIM2Q14190 667 aaPredicted RBP5.27□□□□□ -1.57
USP25-207ENST00000464435 DCTN1Q14203 1278 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 TBRG1Q3YBR2 411 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 TBC1D3GQ6DHY5 549 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 TBC1D3CQ6IPX1 549 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 MTHFD1LQ6UB35 978 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 KYAT3Q6YP21 454 aaKnown RBP5.27□□□□□ -1.57
USP25-207ENST00000464435 TBC1D3Q8IZP1 549 aaPredicted RBP5.27□□□□□ -1.57
USP25-207ENST00000464435 NGDNQ8NEJ9 315 aaKnown RBP5.27□□□□□ -1.57
USP25-207ENST00000464435 GLMPQ8WWB7 406 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 SEC62Q99442 399 aaKnown RBP5.27□□□□□ -1.57
USP25-207ENST00000464435 REEP2Q9BRK0 252 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 GPR63Q9BZJ6 419 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 SEMA4CQ9C0C4 833 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 ASIC5Q9NY37 505 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 FLRT1Q9NZU1 646 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 PI4KBQ9UBF8 816 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 ADAM21Q9UKJ8 722 aa5.27□□□□□ -1.57
USP25-207ENST00000464435 ARHGEF17Q96PE2 2063 aaPredicted RBP5.27□□□□□ -1.57
USP25-207ENST00000464435 WIPF3A6NGB9 483 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 TARM1B6A8C7 271 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 KLK10O43240 276 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 EXOC3O60645 756 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 CYP3A4P08684 503 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 HNRNPA1P09651 372 aaKnown RBP eCLIP5.26□□□□□ -1.57
USP25-207ENST00000464435 LYL1P12980 280 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 MATN1P21941 496 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 MPP1Q00013 466 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 TLE3Q04726 772 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 LMOD3Q0VAK6 560 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 TBC1D25Q3MII6 688 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 CTXN3Q4LDR2 81 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 LRCH2Q5VUJ6 765 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 ATG16L1Q676U5 607 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 DENND2CQ68D51 928 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 RETSATQ6NUM9 610 aa5.26□□□□□ -1.57
USP25-207ENST00000464435 BCDIN3DQ7Z5W3 292 aaKnown RBP5.26□□□□□ -1.57
USP25-207ENST00000464435 C12orf76Q8N812 135 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms