RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ADAMTS20P59510 1910 aa20.59■□□□□ 0.89
VARS-221ENST00000463184 KNL1Q8NG31 2342 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 LAMA5O15230 3695 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 O00370 1275 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 SLC16A3O15427 465 aaKnown RBP20.58■□□□□ 0.89
VARS-221ENST00000463184 IRAK2O43187 625 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 MSI1O43347 362 aaKnown RBP20.58■□□□□ 0.89
VARS-221ENST00000463184 CD27P26842 260 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 DAOAP59103 153 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 PKDCCQ504Y2 493 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 PIK3R6Q5UE93 754 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 NUGGCQ68CJ6 796 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 MSANTD2Q6P1R3 559 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 C19orf48Q6RUI8 117 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 GALNT15Q8N3T1 639 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 MDM1Q8TC05 714 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 TSG101Q99816 390 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 DKK4Q9UBT3 224 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 SCML1Q9UN30 329 aa20.58■□□□□ 0.89
VARS-221ENST00000463184 PTPRBP23467 1997 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 CABIN1Q9Y6J0 2220 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 TNFSF14O43557 240 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 PCDHGA12O60330 932 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 TBL1XO60907 577 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 FSBPO95073 299 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 LCP1P13796 627 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 TBXAS1P24557 533 aaPredicted RBP20.57■□□□□ 0.88
VARS-221ENST00000463184 SLC11A2P49281 568 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 SGSHP51688 502 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 FKBP3Q00688 224 aaKnown RBP20.57■□□□□ 0.88
VARS-221ENST00000463184 ZNF776Q68DI1 518 aaPredicted RBP20.57■□□□□ 0.88
VARS-221ENST00000463184 LCLAT1Q6UWP7 414 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 ZC3H3Q8IXZ2 948 aaKnown RBP20.57■□□□□ 0.88
VARS-221ENST00000463184 UBR7Q8N806 425 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 NBEAQ8NFP9 2946 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 IRGQQ8WZA9 623 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 AZIN2Q96A70 460 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 TIGD1Q96MW7 591 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 RMND1Q9NWS8 449 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.57■□□□□ 0.88
VARS-221ENST00000463184 NCKAP1Q9Y2A7 1128 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 BTBD3Q9Y2F9 522 aa20.57■□□□□ 0.88
VARS-221ENST00000463184 DFNA5O60443 496 aa20.56■□□□□ 0.88
VARS-221ENST00000463184 IGLV3-27P01718 113 aa20.56■□□□□ 0.88
VARS-221ENST00000463184 PAEPP09466 180 aa20.56■□□□□ 0.88
VARS-221ENST00000463184 CD70P32970 193 aa20.56■□□□□ 0.88
VARS-221ENST00000463184 PRCPP42785 496 aa20.56■□□□□ 0.88
VARS-221ENST00000463184 GRK6P43250 576 aa20.56■□□□□ 0.88
VARS-221ENST00000463184 CCT8P50990 548 aa20.56■□□□□ 0.88
VARS-221ENST00000463184 COBLL1Q53SF7 1204 aa20.56■□□□□ 0.88
VARS-221ENST00000463184 RFWD3Q6PCD5 774 aa20.56■□□□□ 0.88
VARS-221ENST00000463184 USP30Q70CQ3 517 aa20.56■□□□□ 0.88
VARS-221ENST00000463184 ADAT2Q7Z6V5 191 aaKnown RBP20.56■□□□□ 0.88
VARS-221ENST00000463184 WFDC5Q8TCV5 224 aa20.56■□□□□ 0.88
VARS-221ENST00000463184 SLC35F5Q8WV83 523 aa20.56■□□□□ 0.88
VARS-221ENST00000463184 MUC22E2RYF6 1773 aaPredicted RBP20.55■□□□□ 0.88
VARS-221ENST00000463184 GOLGA8CPA6NN73 597 aa20.55■□□□□ 0.88
VARS-221ENST00000463184 GOLGA6L22H0YM25 854 aa20.55■□□□□ 0.88
VARS-221ENST00000463184 ACSL4O60488 711 aa20.55■□□□□ 0.88
VARS-221ENST00000463184 SLC6A4P31645 630 aa20.55■□□□□ 0.88
VARS-221ENST00000463184 ST8SIA6P61647 398 aa20.55■□□□□ 0.88
VARS-221ENST00000463184 SFSWAPQ12872 951 aaKnown RBP20.55■□□□□ 0.88
VARS-221ENST00000463184 COL28A1Q2UY09 1125 aa20.55■□□□□ 0.88
VARS-221ENST00000463184 PMF1Q6P1K2 205 aa20.55■□□□□ 0.88
VARS-221ENST00000463184 PDZD3Q86UT5 571 aa20.55■□□□□ 0.88
VARS-221ENST00000463184 MFN1Q8IWA4 741 aa20.55■□□□□ 0.88
VARS-221ENST00000463184 FIBINQ8TAL6 211 aa20.55■□□□□ 0.88
VARS-221ENST00000463184 TTC17Q96AE7 1141 aa20.55■□□□□ 0.88
VARS-221ENST00000463184 DDX50Q9BQ39 737 aaKnown RBP20.55■□□□□ 0.88
VARS-221ENST00000463184 RSPH9Q9H1X1 276 aaPredicted RBP20.55■□□□□ 0.88
VARS-221ENST00000463184 ARMCX3Q9UH62 379 aaPredicted RBP20.55■□□□□ 0.88
VARS-221ENST00000463184 GOLGA6L7A0A1B0GV03 622 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 TYW5A2RUC4 315 aaKnown RBP20.54■□□□□ 0.88
VARS-221ENST00000463184 H0Y8X5 98 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 KCNK3O14649 394 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 PAPSS1O43252 624 aaPredicted RBP20.54■□□□□ 0.88
VARS-221ENST00000463184 LTFP02788 710 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 ASLP04424 464 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 CTSKP43235 329 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 RGS7P49802 495 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 TBX4P57082 545 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 RACK1P63244 317 aaKnown RBP20.54■□□□□ 0.88
VARS-221ENST00000463184 LRMPQ12912 555 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 STILQ15468 1287 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 CNGA2Q16280 664 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 INAVAQ3KP66 663 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 FAM133BQ5BKY9 247 aaKnown RBP20.54■□□□□ 0.88
VARS-221ENST00000463184 ZNF658Q5TYW1 1059 aaPredicted RBP20.54■□□□□ 0.88
VARS-221ENST00000463184 KIAA0895LQ68EN5 471 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 ANKRD40Q6AI12 368 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 TMEM270Q6UE05 265 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 TFAP2BQ92481 460 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 SLC35C1Q96A29 364 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 MYO19Q96H55 970 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 LMLNQ96KR4 655 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 HSFY1Q96LI6 401 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 ORAI3Q9BRQ5 295 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 PABPC3Q9H361 631 aaKnown RBP20.54■□□□□ 0.88
VARS-221ENST00000463184 SCUBE2Q9NQ36 999 aa20.54■□□□□ 0.88
VARS-221ENST00000463184 RAXQ9Y2V3 346 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms