RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 DLDP09622 509 aaKnown RBP19.65■□□□□ 0.74
VARS-220ENST00000461874 OXTRP30559 389 aa19.65■□□□□ 0.74
VARS-220ENST00000461874 RPS24P62847 133 aaKnown RBP19.65■□□□□ 0.74
VARS-220ENST00000461874 EIF4EBP2Q13542 120 aaPredicted RBP19.65■□□□□ 0.74
VARS-220ENST00000461874 ZC3H12AQ5D1E8 599 aaKnown RBP19.65■□□□□ 0.74
VARS-220ENST00000461874 MS4A13Q5J8X5 152 aa19.65■□□□□ 0.74
VARS-220ENST00000461874 MIIPQ5JXC2 388 aa19.65■□□□□ 0.74
VARS-220ENST00000461874 DPY19L2P1Q6NXN4 242 aa19.65■□□□□ 0.74
VARS-220ENST00000461874 MFN1Q8IWA4 741 aa19.65■□□□□ 0.74
VARS-220ENST00000461874 OR2T3Q8NH03 318 aa19.65■□□□□ 0.74
VARS-220ENST00000461874 PPP1R13BQ96KQ4 1090 aa19.65■□□□□ 0.74
VARS-220ENST00000461874 TUBGCP2Q9BSJ2 902 aa19.65■□□□□ 0.74
VARS-220ENST00000461874 CAPN10Q9HC96 672 aa19.65■□□□□ 0.74
VARS-220ENST00000461874 XPO7Q9UIA9 1087 aaKnown RBP19.65■□□□□ 0.74
VARS-220ENST00000461874 TYW5A2RUC4 315 aaKnown RBP19.64■□□□□ 0.73
VARS-220ENST00000461874 APOEP02649 317 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 GLI1P08151 1106 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 C7P10643 843 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 PRKCSHP14314 528 aaPredicted RBP19.64■□□□□ 0.73
VARS-220ENST00000461874 POLR2EP19388 210 aaKnown RBP19.64■□□□□ 0.73
VARS-220ENST00000461874 CLCN1P35523 988 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 ANP32AP39687 249 aaKnown RBP19.64■□□□□ 0.73
VARS-220ENST00000461874 MAPK8P45983 427 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 PITX1P78337 314 aaPredicted RBP19.64■□□□□ 0.73
VARS-220ENST00000461874 GFPT1Q06210 699 aaPredicted RBP19.64■□□□□ 0.73
VARS-220ENST00000461874 UAP1L1Q3KQV9 507 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 HSP90AA4PQ58FG1 418 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 DCAF6Q58WW2 860 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 SYCP2LQ5T4T6 812 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 PSAPL1Q6NUJ1 521 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 SLC47A2Q86VL8 602 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 PASD1Q8IV76 773 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 ZNF366Q8N895 744 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 TTC17Q96AE7 1141 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 SLC2A13Q96QE2 648 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 FSCN3Q9NQT6 498 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 LMBRD1Q9NUN5 540 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 ASNSD1Q9NWL6 643 aa19.64■□□□□ 0.73
VARS-220ENST00000461874 ASCC3Q8N3C0 2202 aaKnown RBP19.63■□□□□ 0.73
VARS-220ENST00000461874 CKAP5Q14008 2032 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 ACADMP11310 421 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 CSRP1P21291 193 aaKnown RBP19.63■□□□□ 0.73
VARS-220ENST00000461874 NOVA1P51513 510 aaKnown RBP19.63■□□□□ 0.73
VARS-220ENST00000461874 CT47A1Q5JQC4 288 aaPredicted RBP19.63■□□□□ 0.73
VARS-220ENST00000461874 EFHC1Q5JVL4 640 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 WDR45BQ5MNZ6 344 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 SH3PXD2AQ5TCZ1 1133 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 FAM71AQ8IYT1 594 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 RGL4Q8IZJ4 473 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 CFAP52Q8N1V2 620 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 CARNMT1Q8N4J0 409 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 CADM4Q8NFZ8 388 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 BTN2A3PQ96KV6 586 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 CNTNAP3BQ96NU0 1288 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 NOX5Q96PH1 765 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 NUP58Q9BVL2 599 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 GPR174Q9BXC1 333 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 CNTNAP3Q9BZ76 1288 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 PRSS16Q9NQE7 514 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 EPG5Q9HCE0 2579 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 CHD8Q9HCK8 2581 aa19.63■□□□□ 0.73
VARS-220ENST00000461874 GIPC1O14908 333 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 HSF2BPO75031 334 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 PNMA6AP0CW24 399 aaPredicted RBP19.62■□□□□ 0.73
VARS-220ENST00000461874 PMLP29590 882 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 KRT9P35527 623 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 CDK17Q00537 523 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 KCNMA1Q12791 1236 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 CDH18Q13634 790 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 KCNJ12Q14500 433 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 FSCBQ5H9T9 825 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 RAP1GAP2Q684P5 730 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 C11orf57Q6ZUT1 292 aaPredicted RBP19.62■□□□□ 0.73
VARS-220ENST00000461874 CACUL1Q86Y37 369 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 LGI2Q8N0V4 545 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 DEFB106AQ8N104 65 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 C1orf131Q8NDD1 294 aaKnown RBP19.62■□□□□ 0.73
VARS-220ENST00000461874 DNASE2BQ8WZ79 361 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 FBRSQ9HAH7 460 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 SAMSN1Q9NSI8 373 aaKnown RBP19.62■□□□□ 0.73
VARS-220ENST00000461874 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.62■□□□□ 0.73
VARS-220ENST00000461874 SUSD2Q9UGT4 822 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 SUN2Q9UH99 717 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 INTS6Q9UL03 887 aaKnown RBP19.62■□□□□ 0.73
VARS-220ENST00000461874 NFE2L3Q9Y4A8 694 aa19.62■□□□□ 0.73
VARS-220ENST00000461874 KCNU1A8MYU2 1149 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 ARHGAP33O14559 1287 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 LUC7L3O95232 432 aaKnown RBP19.61■□□□□ 0.73
VARS-220ENST00000461874 GNSP15586 552 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 TACR2P21452 398 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 MAOBP27338 520 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 CSKP41240 450 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 ATXN3P54252 364 aaPredicted RBP19.61■□□□□ 0.73
VARS-220ENST00000461874 SNX16P57768 344 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 BPIFB4P59827 614 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 KLHDC7AQ5VTJ3 777 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 OR6B2Q6IFH4 312 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 OLFML1Q6UWY5 402 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 FAM183BPQ6ZVS7 135 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 CHSY1Q86X52 802 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms