RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 ACTN2P35609 894 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 NXPH1P58417 271 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 YWHAGP61981 247 aaKnown RBP eCLIP12.36□□□□□ -0.43
HCFC1-204ENST00000461098 PROX2Q3B8N5 592 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 PM20D1Q6GTS8 502 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 SLC9A9Q8IVB4 645 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 NDRG1Q92597 394 aaKnown RBP12.36□□□□□ -0.43
HCFC1-204ENST00000461098 TTC9Q92623 222 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 DHX58Q96C10 678 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 TMA16Q96EY4 203 aaKnown RBP12.36□□□□□ -0.43
HCFC1-204ENST00000461098 MRGPRX3Q96LB0 322 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 BACH2Q9BYV9 841 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 UBXN6Q9BZV1 441 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 CUEDC2Q9H467 287 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 ERVMER34-1Q9H9K5 563 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 CPNE5Q9HCH3 593 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 SUN2Q9UH99 717 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 ADAMTS1Q9UHI8 967 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 SCML1Q9UN30 329 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 CLCA2Q9UQC9 943 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 PIEZO2Q9H5I5 2752 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 SPTA1P02549 2419 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 A0A1W2PP55 124 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 B8ZZF3 427 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 TLR4O00206 839 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 MID1O15344 667 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 YKT6O15498 198 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 SIN3BO75182 1162 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 KIF20AO95235 890 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 CCR5P51681 352 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 AMPD3Q01432 767 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 RHDQ02161 417 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 LY6DQ14210 128 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 TAF1BQ53T94 588 aaPredicted RBP12.35□□□□□ -0.43
HCFC1-204ENST00000461098 C9orf64Q5T6V5 341 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 PIGZQ86VD9 579 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 AADATQ8N5Z0 425 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 FAM181AQ8N9Y4 354 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 OR2T34Q8NGX1 318 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 TMC2Q8TDI7 906 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 SNRNP27Q8WVK2 155 aaKnown RBP12.35□□□□□ -0.43
HCFC1-204ENST00000461098 TTC17Q96AE7 1141 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 NAF1Q96HR8 494 aaKnown RBP12.35□□□□□ -0.43
HCFC1-204ENST00000461098 BLZF1Q9H2G9 400 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 CLMPQ9H6B4 373 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 CYP3A43Q9HB55 503 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 GDF3Q9NR23 364 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 AASDHPPTQ9NRN7 309 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 PPP4R2Q9NY27 417 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 SFMBT1Q9UHJ3 866 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 INTS6Q9UL03 887 aaKnown RBP12.35□□□□□ -0.43
HCFC1-204ENST00000461098 STRIP2Q9ULQ0 834 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 NCKAP1Q9Y2A7 1128 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 SSUH2Q9Y2M2 353 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 PCDHB1Q9Y5F3 818 aa12.35□□□□□ -0.43
HCFC1-204ENST00000461098 UBR5O95071 2799 aaPredicted RBP12.35□□□□□ -0.43
HCFC1-204ENST00000461098 TULP2O00295 520 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 IKBKBO14920 756 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 LATO43561 262 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 ATP5BP06576 529 aaKnown RBP12.34□□□□□ -0.43
HCFC1-204ENST00000461098 CD58P19256 250 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 NASPP49321 788 aaPredicted RBP12.34□□□□□ -0.43
HCFC1-204ENST00000461098 ARRB1P49407 418 aaPredicted RBP12.34□□□□□ -0.43
HCFC1-204ENST00000461098 HARS2P49590 506 aaKnown RBP12.34□□□□□ -0.43
HCFC1-204ENST00000461098 CUL4AQ13619 759 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 ARID5BQ14865 1188 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 CST6Q15828 149 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 HNRNPA1L2Q32P51 320 aaKnown RBP12.34□□□□□ -0.43
HCFC1-204ENST00000461098 ADGRF1Q5T601 910 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 ARHGAP40Q5TG30 622 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 SHC4Q6S5L8 630 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 RSRC2Q7L4I2 434 aaKnown RBP12.34□□□□□ -0.43
HCFC1-204ENST00000461098 ARHGAP18Q8N392 663 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 LINC00301Q8NCQ3 95 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 ZNF248Q8NDW4 579 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 SKA1Q96BD8 255 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 MYEOVQ96EZ4 313 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 FAM129BQ96TA1 746 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 LGMNQ99538 433 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 KCTD10Q9H3F6 313 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 ARHGAP20Q9P2F6 1191 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 FZD4Q9ULV1 537 aa12.34□□□□□ -0.43
HCFC1-204ENST00000461098 DOCK9Q9BZ29 2069 aa12.33□□□□□ -0.44
HCFC1-204ENST00000461098 GOLGA6L7A0A1B0GV03 622 aa12.33□□□□□ -0.44
HCFC1-204ENST00000461098 PVALEFA0A1B0GWK0 134 aa12.33□□□□□ -0.44
HCFC1-204ENST00000461098 LRRC72A6NJI9 287 aa12.33□□□□□ -0.44
HCFC1-204ENST00000461098 TRIM38O00635 465 aa12.33□□□□□ -0.44
HCFC1-204ENST00000461098 ARHGAP6O43182 974 aa12.33□□□□□ -0.44
HCFC1-204ENST00000461098 RNASEH2AO75792 299 aaKnown RBP12.33□□□□□ -0.44
HCFC1-204ENST00000461098 DXOO77932 396 aaKnown RBP12.33□□□□□ -0.44
HCFC1-204ENST00000461098 LATS1O95835 1130 aa12.33□□□□□ -0.44
HCFC1-204ENST00000461098 ZBED1O96006 694 aa12.33□□□□□ -0.44
HCFC1-204ENST00000461098 MT-CO3P00414 261 aa12.33□□□□□ -0.44
HCFC1-204ENST00000461098 C6P13671 934 aa12.33□□□□□ -0.44
HCFC1-204ENST00000461098 POLR2EP19388 210 aaKnown RBP12.33□□□□□ -0.44
HCFC1-204ENST00000461098 SYT1P21579 422 aa12.33□□□□□ -0.44
HCFC1-204ENST00000461098 SLC6A4P31645 630 aa12.33□□□□□ -0.44
HCFC1-204ENST00000461098 PIK3CAP42336 1068 aa12.33□□□□□ -0.44
HCFC1-204ENST00000461098 TKTL1P51854 596 aa12.33□□□□□ -0.44
HCFC1-204ENST00000461098 ADPRHP54922 357 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms