RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 SLC44A3Q8N4M1 653 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 LZTR1Q8N653 840 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 FGF14Q92915 247 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 RPRD1AQ96P16 312 aaPredicted RBP11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 KXD1Q9BQD3 176 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 ZYG11BQ9C0D3 744 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 SMG9Q9H0W8 520 aaKnown RBP11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 DHX35Q9H5Z1 703 aaKnown RBP11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 PPARGC1AQ9UBK2 798 aaKnown RBP11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 FZD10Q9ULW2 581 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 CCL26Q9Y258 94 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 ZKSCAN5Q9Y2L8 839 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 MRPS17Q9Y2R5 130 aaKnown RBP11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 A0A1B0GVM2 712 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 RCCD1A6NED2 376 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 TCAF2A6NFQ2 919 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 GOLGA8CPA6NN73 597 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 MAN2B1O00754 1011 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 MOCS3O95396 460 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 BMP1P13497 986 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 TACR2P21452 398 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 FCARP24071 287 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 SERPINB6P35237 376 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 EIF2DP41214 584 aaKnown RBP11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 CDH4P55283 916 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 TPI1P60174 286 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 ZNF177Q13360 481 aaPredicted RBP11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 SLC12A1Q13621 1099 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 CDH18Q13634 790 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 AUHQ13825 339 aaKnown RBP11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 TFDP2Q14188 446 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 RPS6KA1Q15418 735 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 DPYSL2Q16555 572 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 ANO4Q32M45 955 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 MS4A13Q5J8X5 152 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 C6orf118Q5T5N4 469 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 TRNP1Q6NT89 227 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 RWDD4Q6NW29 188 aaKnown RBP11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 CHST9Q7L1S5 443 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 FAM217AQ8IXS0 508 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 HSPH1Q92598 858 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 TBC1D31Q96DN5 1066 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 BTBD6Q96KE9 485 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 FERMT1Q9BQL6 677 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 FAM83CQ9BQN1 747 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 ZNF670Q9BS34 389 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 BBS2Q9BXC9 721 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 SLC2A4RGQ9NR83 387 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 HAUS2Q9NVX0 235 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 TRMT1Q9NXH9 659 aaKnown RBP11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 MARK1Q9P0L2 795 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 DUSP10Q9Y6W6 482 aa11.38□□□□□ -0.59
SMNDC1-203ENST00000460483 MTCL1Q9Y4B5 1905 aaKnown RBP11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 GRID2IPA4D2P6 1211 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 EEF2KO00418 725 aaKnown RBP11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 HOXC11O43248 304 aaPredicted RBP11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 TIMM44O43615 452 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 CREB3O43889 395 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 SRGAP2O75044 1071 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 KLKB1P03952 638 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 RARAP10276 462 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 ADH5P11766 374 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 CTNNA2P26232 953 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 EPHB2P29323 1055 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 CTNNA1P35221 906 aaKnown RBP11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 MAPKAPK2P49137 400 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 CDH6P55285 790 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 PITX1P78337 314 aaPredicted RBP11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 SLC25A11Q02978 314 aaKnown RBP11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 ZNF252P-AS1Q0IIN9 211 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 DHCR24Q15392 516 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 EML3Q32P44 896 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 PPP6R3Q5H9R7 873 aaPredicted RBP11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 SH3PXD2AQ5TCZ1 1133 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 PIK3R6Q5UE93 754 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 RAP1GAP2Q684P5 730 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 ZNF783Q6ZMS7 281 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 SETD3Q86TU7 594 aaPredicted RBP11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 RALGPS2Q86X27 583 aaPredicted RBP11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 KATNAL2Q8IYT4 538 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 LGI2Q8N0V4 545 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 EXD1Q8NHP7 514 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 MAIP1Q8WWC4 291 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 NELL2Q99435 816 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 NAP1L3Q99457 506 aaPredicted RBP11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 SNRNP25Q9BV90 132 aaKnown RBP11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 CALN1Q9BXU9 219 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 TRIM7Q9C029 511 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 ECT2Q9H8V3 914 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 PRDM6Q9NQX0 595 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 DEC1Q9P2X7 70 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 VANGL2Q9ULK5 521 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 DUSP12Q9UNI6 340 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 EFR3BQ9Y2G0 817 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 PCDHA3Q9Y5H8 950 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 HS3ST4Q9Y661 456 aa11.37□□□□□ -0.59
SMNDC1-203ENST00000460483 WNT6Q9Y6F9 365 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms