RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 MBOAT7Q96N66 472 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 ZNF670Q9BS34 389 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 ELOVL4Q9GZR5 314 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 TKTL2Q9H0I9 626 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 FBXO44Q9H4M3 255 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 IRAK4Q9NWZ3 460 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 MYO1GB0I1T2 1018 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 SERPINF2P08697 491 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 USP17L7P0C7H9 530 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 NUMBP49757 651 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 NME5P56597 212 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 TFAP2DQ7Z6R9 452 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 DDX53Q86TM3 631 aaKnown RBP15.11■□□□□ 0.01
PTPRU-205ENST00000460170 TRABD2AQ86V40 505 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 TMEM86AQ8N2M4 240 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 ZNF398Q8TD17 642 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 PRCCQ92733 491 aaPredicted RBP15.11■□□□□ 0.01
PTPRU-205ENST00000460170 PHF21BQ96EK2 531 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 CATSPER2Q96P56 530 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 HES2Q9Y543 173 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 TRIM16O95361 564 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 ERVK-10P10266 1014 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 TBX4P57082 545 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 GTF2H3Q13889 308 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 FUT11Q495W5 492 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 SCARA3Q6AZY7 606 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 TMEM169Q96HH4 297 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 VPS50Q96JG6 964 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 NEUROG2Q9H2A3 272 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 XPNPEP3Q9NQH7 507 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 ARHGAP28Q9P2N2 729 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 EIF3LQ9Y262 564 aaKnown RBP15.1■□□□□ 0.01
PTPRU-205ENST00000460170 ANKRD6Q9Y2G4 727 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 R3HDM2Q9Y2K5 976 aaKnown RBP15.1■□□□□ 0.01
PTPRU-205ENST00000460170 RIPK3Q9Y572 518 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 DCXO43602 365 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 RAMP2O60895 175 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 PSMB4P28070 264 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 CSE1LP55060 971 aaKnown RBP15.1■□□□□ 0.01
PTPRU-205ENST00000460170 ANKRD52Q8NB46 1076 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 SERPINB11Q96P15 392 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 UBXN6Q9BZV1 441 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 TRIM45Q9H8W5 580 aaPredicted RBP15.1■□□□□ 0.01
PTPRU-205ENST00000460170 LRCH1Q9Y2L9 728 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 FAM32AQ9Y421 112 aaKnown RBP15.1■□□□□ 0.01
PTPRU-205ENST00000460170 ZMYM2Q9UBW7 1377 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 XRN1Q8IZH2 1706 aaKnown RBP15.1■□□□□ 0.01
PTPRU-205ENST00000460170 TCRBV7S2A1N4TA0A589 114 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 FARP2O94887 1054 aaPredicted RBP15.1■□□□□ 0.01
PTPRU-205ENST00000460170 MT-CO1P00395 513 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 PSTKQ8IV42 348 aaKnown RBP15.1■□□□□ 0.01
PTPRU-205ENST00000460170 HS6ST3Q8IZP7 471 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 PIWIL2Q8TC59 973 aaKnown RBP15.1■□□□□ 0.01
PTPRU-205ENST00000460170 DTNBP1Q96EV8 351 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 DACH2Q96NX9 599 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 SCUBE2Q9NQ36 999 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 IL1RAPL1Q9NZN1 696 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 TRPM5Q9NZQ8 1165 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 RGPD8O14715 1765 aaPredicted RBP15.1■□□□□ 0.01
PTPRU-205ENST00000460170 GOLGA8TH3BQL2 631 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 EGFRP00533 1210 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 GJB1P08034 283 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 PSMC3P17980 439 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 ASTE1Q2TB18 679 aaPredicted RBP15.1■□□□□ 0.01
PTPRU-205ENST00000460170 PIGZQ86VD9 579 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 VPS37AQ8NEZ2 397 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 JOSD2Q8TAC2 188 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 GAD1Q99259 594 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 SLCO1B3Q9NPD5 702 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 UMODL1Q5DID0 1318 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 NRCAMQ92823 1304 aa15.1■□□□□ 0.01
PTPRU-205ENST00000460170 KANSL1LA0AUZ9 987 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 AGPSO00116 658 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 PIAS1O75925 651 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 RHOCP08134 193 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 NPR3P17342 541 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 SERPINB10P48595 397 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 POLD3Q15054 466 aaPredicted RBP15.09■□□□□ 0.01
PTPRU-205ENST00000460170 GALNTL6Q49A17 601 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 ZC3H12AQ5D1E8 599 aaKnown RBP15.09■□□□□ 0.01
PTPRU-205ENST00000460170 MAP1SQ66K74 1059 aaPredicted RBP15.09■□□□□ 0.01
PTPRU-205ENST00000460170 MFSD5Q6N075 450 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 DDI1Q8WTU0 396 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 LHX5Q9H2C1 402 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 ATXN3LQ9H3M9 355 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 MEI4A8MW99 385 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 NR5A2O00482 541 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 TPP1O14773 563 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 C4BPAP04003 597 aaKnown RBP15.09■□□□□ 0.01
PTPRU-205ENST00000460170 KPNA1P52294 538 aaPredicted RBP15.09■□□□□ 0.01
PTPRU-205ENST00000460170 KCNJ2P63252 427 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 NFYCQ13952 458 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 CACHD1Q5VU97 1274 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 WSCD1Q658N2 575 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 RRM2BQ7LG56 351 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 USP6NLQ92738 828 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 CLPBQ9H078 707 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 RNPEPL1Q9HAU8 725 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 TLR8Q9NR97 1041 aaKnown RBP15.09■□□□□ 0.01
PTPRU-205ENST00000460170 COL20A1Q9P218 1284 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms