RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TCP11L2Q8N4U5 519 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 CAGE1Q8TC20 777 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 KRTAP9-2Q9BYQ4 174 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 CLPBQ9H078 707 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 JMJD4Q9H9V9 463 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 SMC4Q9NTJ3 1288 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 ASIC5Q9NY37 505 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 PACSIN3Q9UKS6 424 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 ARHGAP26Q9UNA1 814 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 MYRFQ9Y2G1 1151 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 AFG3L2Q9Y4W6 797 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 HS3ST3A1Q9Y663 406 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 SPATA31A1Q5TZJ5 1347 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 H3BNC9 293 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 GCATO75600 419 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 JTBO76095 146 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 RHOBTB3O94955 611 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 GCP02774 474 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 HNRNPA1P09651 372 aaKnown RBP eCLIP6.08□□□□□ -1.44
CCDC50-203ENST00000460064 ATP1A3P13637 1013 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 TNNT1P13805 278 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 ATF7P17544 494 aaPredicted RBP6.08□□□□□ -1.44
CCDC50-203ENST00000460064 HOXD12P35452 270 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 STAT6P42226 847 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 VPS41P49754 854 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 NR1H2P55055 460 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 SLC37A1P57057 533 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 GEMIN4P57678 1058 aaKnown RBP6.08□□□□□ -1.44
CCDC50-203ENST00000460064 KCNB1Q14721 858 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 WDR78Q5VTH9 848 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 FAAH2Q6GMR7 532 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 CRIP3Q6Q6R5 217 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 DCDC5Q6ZRR9 648 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 TSPYL6Q8N831 410 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 PCYOX1LQ8NBM8 494 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 ADAMTS18Q8TE60 1221 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 KCNJ9Q92806 393 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 NPAS1Q99742 590 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 PRRX2Q99811 253 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 HTATIP2Q9BUP3 242 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 RNF26Q9BY78 433 aaPredicted RBP6.08□□□□□ -1.44
CCDC50-203ENST00000460064 PAIP1Q9H074 479 aaKnown RBP6.08□□□□□ -1.44
CCDC50-203ENST00000460064 SFXN1Q9H9B4 322 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 CPNE5Q9HCH3 593 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 PREBQ9HCU5 417 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 IRAK4Q9NWZ3 460 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 GAR1Q9NY12 217 aaKnown RBP6.08□□□□□ -1.44
CCDC50-203ENST00000460064 SH3BP4Q9P0V3 963 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 SEMA5BQ9P283 1151 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 ENTPD2Q9Y5L3 495 aa6.08□□□□□ -1.44
CCDC50-203ENST00000460064 PEX12O00623 359 aa6.07□□□□□ -1.44
CCDC50-203ENST00000460064 MGST3O14880 152 aa6.07□□□□□ -1.44
CCDC50-203ENST00000460064 MATN3O15232 486 aa6.07□□□□□ -1.44
CCDC50-203ENST00000460064 SFPQP23246 707 aaKnown RBP eCLIP6.07□□□□□ -1.44
CCDC50-203ENST00000460064 ALKBH1Q13686 389 aaKnown RBP6.07□□□□□ -1.44
CCDC50-203ENST00000460064 SIM2Q14190 667 aaPredicted RBP6.07□□□□□ -1.44
CCDC50-203ENST00000460064 PUM1Q14671 1186 aaKnown RBP eCLIP6.07□□□□□ -1.44
CCDC50-203ENST00000460064 ZXDCQ2QGD7 858 aaPredicted RBP6.07□□□□□ -1.44
CCDC50-203ENST00000460064 RUNDC3AQ59EK9 446 aa6.07□□□□□ -1.44
CCDC50-203ENST00000460064 VSTM1Q6UX27 236 aa6.07□□□□□ -1.44
CCDC50-203ENST00000460064 Q6ZPA2 131 aa6.07□□□□□ -1.44
CCDC50-203ENST00000460064 ST8SIA4Q92187 359 aa6.07□□□□□ -1.44
CCDC50-203ENST00000460064 GPR78Q96P69 363 aa6.07□□□□□ -1.44
CCDC50-203ENST00000460064 BBC3Q96PG8 261 aaPredicted RBP6.07□□□□□ -1.44
CCDC50-203ENST00000460064 FYTTD1Q96QD9 318 aaKnown RBP6.07□□□□□ -1.44
CCDC50-203ENST00000460064 THAP1Q9NVV9 213 aa6.07□□□□□ -1.44
CCDC50-203ENST00000460064 ASNSD1Q9NWL6 643 aa6.07□□□□□ -1.44
CCDC50-203ENST00000460064 MTMR4Q9NYA4 1195 aa6.07□□□□□ -1.44
CCDC50-203ENST00000460064 SLC17A6Q9P2U8 582 aa6.07□□□□□ -1.44
CCDC50-203ENST00000460064 TBX20Q9UMR3 447 aa6.07□□□□□ -1.44
CCDC50-203ENST00000460064 SUFUQ9UMX1 484 aa6.07□□□□□ -1.44
CCDC50-203ENST00000460064 GDAQ9Y2T3 454 aa6.07□□□□□ -1.44
CCDC50-203ENST00000460064 TCRBV5S1A1TA0A578 114 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 PRYO14603 147 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 FOXN1O15353 648 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 DHX16O60231 1041 aaKnown RBP6.06□□□□□ -1.44
CCDC50-203ENST00000460064 CD4P01730 458 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 WEE2P0C1S8 567 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 CYP2D6P10635 497 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 IGFBP2P18065 325 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 KRT4P19013 534 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 NDUFS1P28331 727 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 CACNA2D1P54289 1103 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 SHC2P98077 582 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 THOC5Q13769 683 aaKnown RBP6.06□□□□□ -1.44
CCDC50-203ENST00000460064 NFIL3Q16649 462 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 PFKFB3Q16875 520 aaPredicted RBP6.06□□□□□ -1.44
CCDC50-203ENST00000460064 SLC9C2Q5TAH2 1124 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 LIPMQ5VYY2 423 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 DENND1BQ6P3S1 775 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 LRRC8DQ7L1W4 858 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 C16orf71Q8IYS4 520 aaPredicted RBP6.06□□□□□ -1.44
CCDC50-203ENST00000460064 ADPRHL1Q8NDY3 354 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 HDAC2Q92769 488 aaKnown RBP6.06□□□□□ -1.44
CCDC50-203ENST00000460064 TIMP4Q99727 224 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 TRIM2Q9C040 744 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 STN1Q9H668 368 aaKnown RBP6.06□□□□□ -1.44
CCDC50-203ENST00000460064 ACAD9Q9H845 621 aa6.06□□□□□ -1.44
CCDC50-203ENST00000460064 TLR8Q9NR97 1041 aaKnown RBP6.06□□□□□ -1.44
CCDC50-203ENST00000460064 HSF4Q9ULV5 492 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms