RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 ZNF445P59923 1031 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 DLG4P78352 724 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 KCNH2Q12809 1159 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 ARHGAP40Q5TG30 622 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 RNF219Q5W0B1 726 aaPredicted RBP8.23□□□□□ -1.09
HPS4-207ENST00000459918 MBLAC2Q68D91 279 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 NCEH1Q6PIU2 408 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 UNC13DQ70J99 1090 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 SCD5Q86SK9 330 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 FMNL3Q8IVF7 1028 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 DHX40Q8IX18 779 aaKnown RBP8.23□□□□□ -1.09
HPS4-207ENST00000459918 ZNF248Q8NDW4 579 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 SNIP1Q8TAD8 396 aaKnown RBP8.23□□□□□ -1.09
HPS4-207ENST00000459918 PARD3BQ8TEW8 1205 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 TMA16Q96EY4 203 aaKnown RBP8.23□□□□□ -1.09
HPS4-207ENST00000459918 P2RY11Q96G91 374 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 SERAC1Q96JX3 654 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 TWNKQ96RR1 684 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 USP28Q96RU2 1077 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 MFRPQ9BY79 579 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 DUSP16Q9BY84 665 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 GZF1Q9H116 711 aaPredicted RBP8.23□□□□□ -1.09
HPS4-207ENST00000459918 TMEM245Q9H330 911 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 PABPC3Q9H361 631 aaKnown RBP8.23□□□□□ -1.09
HPS4-207ENST00000459918 OLA1Q9NTK5 396 aaKnown RBP8.23□□□□□ -1.09
HPS4-207ENST00000459918 KBTBD4Q9NVX7 518 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 SUN2Q9UH99 717 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 SCML1Q9UN30 329 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 ASXL3Q9C0F0 2248 aa8.23□□□□□ -1.09
HPS4-207ENST00000459918 KNL1Q8NG31 2342 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 PYCARD-AS1I3L0S3 204 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 MID1O15344 667 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 TBL1XO60907 577 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 SDC3O75056 442 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 ASS1P00966 412 aaKnown RBP8.22□□□□□ -1.09
HPS4-207ENST00000459918 C4BPAP04003 597 aaKnown RBP8.22□□□□□ -1.09
HPS4-207ENST00000459918 IGHV4-34P06331 123 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 CKMT2P17540 419 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 EPHA8P29322 1005 aaPredicted RBP8.22□□□□□ -1.09
HPS4-207ENST00000459918 CASP1P29466 404 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 UCNP55089 124 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 TLE3Q04726 772 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 CDH18Q13634 790 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 RTP5Q14D33 572 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 SLC39A14Q15043 492 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 CST6Q15828 149 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 TBC1D25Q3MII6 688 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 ZACNQ401N2 412 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 PPP1R26Q5T8A7 1209 aaPredicted RBP8.22□□□□□ -1.09
HPS4-207ENST00000459918 FBXL19Q6PCT2 694 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 USP30Q70CQ3 517 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 MMAAQ8IVH4 418 aaKnown RBP8.22□□□□□ -1.09
HPS4-207ENST00000459918 MFN1Q8IWA4 741 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 SPACA3Q8IXA5 215 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 C12orf56Q8IXR9 622 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 SIX6OS1Q8N1H7 587 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 OXR1Q8N573 874 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 FAM181AQ8N9Y4 354 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 OR14C36Q8NHC7 312 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 PLEKHO2Q8TD55 490 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 SAP25Q8TEE9 199 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 EDEM1Q92611 657 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 NIF3L1Q9GZT8 377 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 MTG2Q9H4K7 406 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 CLMPQ9H6B4 373 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 LRRC4Q9HBW1 653 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 CPNE5Q9HCH3 593 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 EXOC1Q9NV70 894 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 STIM2Q9P246 746 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 SFMBT1Q9UHJ3 866 aa8.22□□□□□ -1.09
HPS4-207ENST00000459918 TBC1D3DA0A087WVF3 549 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 TBC1D3IA0A087WXS9 549 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 TBC1D3EA0A087X179 549 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 TBC1D3KA0A087X1G2 549 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 TBC1D3FA6NER0 549 aaPredicted RBP8.21□□□□□ -1.1
HPS4-207ENST00000459918 TBC1D3LB9A6J9 549 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 TLR4O00206 839 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 SPTLC2O15270 562 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 POLR2DO15514 142 aaKnown RBP8.21□□□□□ -1.1
HPS4-207ENST00000459918 KLK10O43240 276 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 PAPSS1O43252 624 aaPredicted RBP8.21□□□□□ -1.1
HPS4-207ENST00000459918 MSI1O43347 362 aaKnown RBP8.21□□□□□ -1.1
HPS4-207ENST00000459918 SLC28A2O43868 658 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 SIN3BO75182 1162 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 MOCS3O95396 460 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 ZBED1O96006 694 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 IL1BP01584 269 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 NR3C1P04150 777 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 TBC1D3HP0C7X1 549 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 KRT13P13646 458 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 CD70P32970 193 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 GCLMP48507 274 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 SLC11A2P49281 568 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 GALCP54803 685 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 RHDQ02161 417 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 KCNC4Q03721 635 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 INCA1Q0VD86 236 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 ILKQ13418 452 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 LY6DQ14210 128 aa8.21□□□□□ -1.1
HPS4-207ENST00000459918 ADGRF1Q5T601 910 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms