RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 FIBINQ8TAL6 211 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 PGAP3Q96FM1 320 aaPredicted RBP23.99■■□□□ 1.43
CBX3-204ENST00000456948 NPY6RQ99463 290 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 ZDHHC4Q9NPG8 344 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 ABCB8Q9NUT2 735 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 THAP10Q9P2Z0 257 aaPredicted RBP23.99■■□□□ 1.43
CBX3-204ENST00000456948 EP300Q09472 2414 aaPredicted RBP23.98■■□□□ 1.43
CBX3-204ENST00000456948 ANKRD62A6NC57 917 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 H0Y626 953 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 RETP07949 1114 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 PABPC1P11940 636 aaKnown RBP23.98■■□□□ 1.43
CBX3-204ENST00000456948 UNGP13051 313 aaPredicted RBP23.98■■□□□ 1.43
CBX3-204ENST00000456948 DESP17661 470 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 HLA-FP30511 346 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 WASP42768 502 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 PITX1P78337 314 aaPredicted RBP23.98■■□□□ 1.43
CBX3-204ENST00000456948 CENPCQ03188 943 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 ASIC2Q16515 512 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 SFMBT2Q5VUG0 894 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 CHST9Q7L1S5 443 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 KIAA2013Q8IYS2 634 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.98■■□□□ 1.43
CBX3-204ENST00000456948 SLC30A5Q8TAD4 765 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 HMGB4Q8WW32 186 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 LOXL4Q96JB6 756 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 C11orf70Q9BRQ4 267 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 CACNA2D2Q9NY47 1150 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 KIAA1522Q9P206 1035 aaPredicted RBP23.98■■□□□ 1.43
CBX3-204ENST00000456948 CLEC4EQ9ULY5 219 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 STON1Q9Y6Q2 735 aa23.98■■□□□ 1.43
CBX3-204ENST00000456948 RPS24P62847 133 aaKnown RBP23.97■■□□□ 1.43
CBX3-204ENST00000456948 SRSF5Q13243 272 aaKnown RBP23.97■■□□□ 1.43
CBX3-204ENST00000456948 LPAL2Q16609 132 aa23.97■■□□□ 1.43
CBX3-204ENST00000456948 C2CD6Q53TS8 623 aa23.97■■□□□ 1.43
CBX3-204ENST00000456948 FIGNQ5HY92 759 aa23.97■■□□□ 1.43
CBX3-204ENST00000456948 SERPINA13PQ6UXR4 307 aa23.97■■□□□ 1.43
CBX3-204ENST00000456948 PHF13Q86YI8 300 aaPredicted RBP23.97■■□□□ 1.43
CBX3-204ENST00000456948 MDGA1Q8NFP4 955 aa23.97■■□□□ 1.43
CBX3-204ENST00000456948 NT5C3BQ969T7 300 aa23.97■■□□□ 1.43
CBX3-204ENST00000456948 P2RY11Q96G91 374 aa23.97■■□□□ 1.43
CBX3-204ENST00000456948 ANTXRLA6NF34 631 aa23.96■■□□□ 1.43
CBX3-204ENST00000456948 MAP3K13O43283 966 aa23.96■■□□□ 1.43
CBX3-204ENST00000456948 LUC7L3O95232 432 aaKnown RBP23.96■■□□□ 1.43
CBX3-204ENST00000456948 CHRM1P11229 460 aaPredicted RBP23.96■■□□□ 1.43
CBX3-204ENST00000456948 SDC4P31431 198 aa23.96■■□□□ 1.43
CBX3-204ENST00000456948 CXCR3P49682 368 aa23.96■■□□□ 1.43
CBX3-204ENST00000456948 RNF43Q68DV7 783 aa23.96■■□□□ 1.43
CBX3-204ENST00000456948 CFAP52Q8N1V2 620 aa23.96■■□□□ 1.43
CBX3-204ENST00000456948 ZC3H10Q96K80 434 aaKnown RBP23.96■■□□□ 1.43
CBX3-204ENST00000456948 RPRD1AQ96P16 312 aaPredicted RBP23.96■■□□□ 1.43
CBX3-204ENST00000456948 ACOX2Q99424 681 aa23.96■■□□□ 1.43
CBX3-204ENST00000456948 SELENOOQ9BVL4 669 aa23.96■■□□□ 1.43
CBX3-204ENST00000456948 TPSD1Q9BZJ3 242 aa23.96■■□□□ 1.43
CBX3-204ENST00000456948 TSPY26PQ9H489 355 aa23.96■■□□□ 1.43
CBX3-204ENST00000456948 TMEM59LQ9UK28 342 aa23.96■■□□□ 1.43
CBX3-204ENST00000456948 WDR87Q6ZQQ6 2873 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 LRRC53A6NM62 1247 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 FOXD2O60548 495 aaPredicted RBP23.95■■□□□ 1.42
CBX3-204ENST00000456948 LRP3O75074 770 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 ZNF217O75362 1048 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 ASLP04424 464 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 KRT3P12035 628 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 RDXP35241 583 aaKnown RBP23.95■■□□□ 1.42
CBX3-204ENST00000456948 SGSHP51688 502 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 ST8SIA6P61647 398 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 C1QBPQ07021 282 aaKnown RBP23.95■■□□□ 1.42
CBX3-204ENST00000456948 SLC12A1Q13621 1099 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 ARL13BQ3SXY8 428 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 FNDC3BQ53EP0 1204 aaKnown RBP23.95■■□□□ 1.42
CBX3-204ENST00000456948 MBLAC2Q68D91 279 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 LRRC31Q6UY01 552 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 IRF2BP2Q7Z5L9 587 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 KIAA0907Q7Z7F0 614 aaPredicted RBP23.95■■□□□ 1.42
CBX3-204ENST00000456948 FAM160A2Q8N612 972 aaPredicted RBP23.95■■□□□ 1.42
CBX3-204ENST00000456948 BAP1Q92560 729 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 PRICKLE1Q96MT3 831 aaPredicted RBP23.95■■□□□ 1.42
CBX3-204ENST00000456948 PCDHB18PQ96TA0 734 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 TBCBQ99426 244 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 TKTL2Q9H0I9 626 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 METTL5Q9NRN9 209 aaKnown RBP23.95■■□□□ 1.42
CBX3-204ENST00000456948 AIPL1Q9NZN9 384 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 XPO7Q9UIA9 1087 aaKnown RBP23.95■■□□□ 1.42
CBX3-204ENST00000456948 HCN2Q9UL51 889 aa23.95■■□□□ 1.42
CBX3-204ENST00000456948 OTOGLQ3ZCN5 2332 aa23.94■■□□□ 1.42
CBX3-204ENST00000456948 SPAG17Q6Q759 2223 aa23.94■■□□□ 1.42
CBX3-204ENST00000456948 A0A1B0GVM2 712 aa23.94■■□□□ 1.42
CBX3-204ENST00000456948 FAM170AA1A519 330 aa23.94■■□□□ 1.42
CBX3-204ENST00000456948 TCAF2A6NFQ2 919 aa23.94■■□□□ 1.42
CBX3-204ENST00000456948 PAGE1O75459 146 aa23.94■■□□□ 1.42
CBX3-204ENST00000456948 DLDP09622 509 aaKnown RBP23.94■■□□□ 1.42
CBX3-204ENST00000456948 PDGFRAP16234 1089 aa23.94■■□□□ 1.42
CBX3-204ENST00000456948 HOXC13P31276 330 aa23.94■■□□□ 1.42
CBX3-204ENST00000456948 FLT3P36888 993 aa23.94■■□□□ 1.42
CBX3-204ENST00000456948 AUHQ13825 339 aaKnown RBP23.94■■□□□ 1.42
CBX3-204ENST00000456948 ZNF234Q14588 700 aa23.94■■□□□ 1.42
CBX3-204ENST00000456948 VCPIP1Q96JH7 1222 aa23.94■■□□□ 1.42
CBX3-204ENST00000456948 SIK2Q9H0K1 926 aa23.94■■□□□ 1.42
CBX3-204ENST00000456948 PIGVQ9NUD9 493 aa23.94■■□□□ 1.42
CBX3-204ENST00000456948 ARHGEF38Q9NXL2 777 aa23.94■■□□□ 1.42
CBX3-204ENST00000456948 SUN2Q9UH99 717 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms