RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 ITM2CQ9NQX7 267 aa13.45□□□□□ -0.26
TREX1-203ENST00000456089 TAB2Q9NYJ8 693 aa13.45□□□□□ -0.26
TREX1-203ENST00000456089 USP36Q9P275 1121 aaKnown RBP13.45□□□□□ -0.26
TREX1-203ENST00000456089 DNAJC12Q9UKB3 198 aa13.45□□□□□ -0.26
TREX1-203ENST00000456089 HBS1LQ9Y450 684 aaKnown RBP13.45□□□□□ -0.26
TREX1-203ENST00000456089 SLCO1B1Q9Y6L6 691 aa13.45□□□□□ -0.26
TREX1-203ENST00000456089 PTPRBP23467 1997 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 SART1O43290 800 aaKnown RBP13.44□□□□□ -0.26
TREX1-203ENST00000456089 TBL1XO60907 577 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 CD59P13987 128 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 KRT9P35527 623 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 NUMBP49757 651 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 SNX16P57768 344 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 BPIFB4P59827 614 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 MYL5Q02045 173 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 APBA1Q02410 837 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 FNDC3BQ53EP0 1204 aaKnown RBP13.44□□□□□ -0.26
TREX1-203ENST00000456089 MIIPQ5JXC2 388 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 DCAF12L1Q5VU92 463 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 UNQ6494/PRO21346Q6UXR6 183 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 SCML4Q8N228 414 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 IRGQQ8WZA9 623 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 PRCCQ92733 491 aaPredicted RBP13.44□□□□□ -0.26
TREX1-203ENST00000456089 TMA16Q96EY4 203 aaKnown RBP13.44□□□□□ -0.26
TREX1-203ENST00000456089 PCMTD1Q96MG8 357 aaPredicted RBP13.44□□□□□ -0.26
TREX1-203ENST00000456089 NOX5Q96PH1 765 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 SLC2A11Q9BYW1 496 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 ADAM33Q9BZ11 813 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 VPS16Q9H269 839 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 MTG2Q9H4K7 406 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 SLC32A1Q9H598 525 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 STIM2Q9P246 746 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 CEP83Q9Y592 693 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 IGF2RP11717 2491 aa13.44□□□□□ -0.26
TREX1-203ENST00000456089 PLXNB3Q9ULL4 1909 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 SH3BP5O60239 455 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 LTFP02788 710 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 PROS1P07225 676 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 ACADMP11310 421 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 CD70P32970 193 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 GRIK2Q13002 908 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 MEA1Q16626 185 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 FAM133BQ5BKY9 247 aaKnown RBP13.43□□□□□ -0.26
TREX1-203ENST00000456089 WDR45BQ5MNZ6 344 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 SYCP2LQ5T4T6 812 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 ADGRF1Q5T601 910 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 SMYD5Q6GMV2 418 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 NADSYN1Q6IA69 706 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 CAVIN1Q6NZI2 390 aaKnown RBP13.43□□□□□ -0.26
TREX1-203ENST00000456089 MSANTD2Q6P1R3 559 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 DENND1BQ6P3S1 775 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 C11orf57Q6ZUT1 292 aaPredicted RBP13.43□□□□□ -0.26
TREX1-203ENST00000456089 ADIPOR2Q86V24 386 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 ADAM32Q8TC27 787 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 SHC3Q92529 594 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 SNX19Q92543 992 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 FAM149B1Q96BN6 582 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 TRIM62Q9BVG3 475 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 IL21RQ9HBE5 538 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 ACP6Q9NPH0 428 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 FANCLQ9NW38 375 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 EIF2B4Q9UI10 523 aaKnown RBP13.43□□□□□ -0.26
TREX1-203ENST00000456089 GGA2Q9UJY4 613 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 KLK13Q9UKR3 277 aa13.43□□□□□ -0.26
TREX1-203ENST00000456089 CAPN9O14815 690 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 NPC1O15118 1278 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 IGLV3-27P01718 113 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 FYNP06241 537 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 SYPP08247 313 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 PABPC1P11940 636 aaKnown RBP13.42□□□□□ -0.26
TREX1-203ENST00000456089 GPD2P43304 727 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 TBX4P57082 545 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 BNC1Q01954 994 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 TYRO3Q06418 890 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 EIF4HQ15056 248 aaKnown RBP13.42□□□□□ -0.26
TREX1-203ENST00000456089 KRT31Q15323 416 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 PTPRNQ16849 979 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 PIK3R6Q5UE93 754 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 MBLAC2Q68D91 279 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 RABEPKQ7Z6M1 372 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 METTL3Q86U44 580 aaKnown RBP13.42□□□□□ -0.26
TREX1-203ENST00000456089 SCUBE3Q8IX30 993 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 CFAP52Q8N1V2 620 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 STK32AQ8WU08 396 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 FOXJ1Q92949 421 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 PRICKLE1Q96MT3 831 aaPredicted RBP13.42□□□□□ -0.26
TREX1-203ENST00000456089 TMEM121BQ9BXQ6 578 aaPredicted RBP13.42□□□□□ -0.26
TREX1-203ENST00000456089 TMEM245Q9H330 911 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 C6orf106Q9H6K1 298 aaPredicted RBP13.42□□□□□ -0.26
TREX1-203ENST00000456089 SYNCQ9H7C4 482 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 SIX2Q9NPC8 291 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 DNAAF2Q9NVR5 837 aaKnown RBP13.42□□□□□ -0.26
TREX1-203ENST00000456089 STOML2Q9UJZ1 356 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 ZMIZ1Q9ULJ6 1067 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 NAALADL1Q9UQQ1 740 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 DOCK9Q9BZ29 2069 aa13.42□□□□□ -0.26
TREX1-203ENST00000456089 KNL1Q8NG31 2342 aa13.41□□□□□ -0.26
TREX1-203ENST00000456089 BECN2A8MW95 431 aa13.41□□□□□ -0.26
TREX1-203ENST00000456089 FOXN3O00409 490 aaPredicted RBP13.41□□□□□ -0.26
TREX1-203ENST00000456089 ZZEF1O43149 2961 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms