RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 OLFML1Q6UWY5 402 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 SLC26A9Q7LBE3 791 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 ATP6V0D2Q8N8Y2 350 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 SLC30A5Q8TAD4 765 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 GAB3Q8WWW8 586 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 FCRL2Q96LA5 508 aaPredicted RBP18.4■□□□□ 0.54
COPS7A-202ENST00000455113 PCDHB18PQ96TA0 734 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 DDIT4Q9NX09 232 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 RRN3Q9NYV6 651 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 STAP1Q9ULZ2 295 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 VPS13AQ96RL7 3174 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 SYNJ2BP-COX16A0A087WUM0 186 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 HRO43593 1189 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 NOS2P35228 1153 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 MTA1Q13330 715 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 USP39Q53GS9 565 aaKnown RBP18.4■□□□□ 0.54
COPS7A-202ENST00000455113 MPP7Q5T2T1 576 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 FAM102AQ5T9C2 384 aaPredicted RBP18.4■□□□□ 0.54
COPS7A-202ENST00000455113 PGBD3Q8N328 593 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 PIWIL1Q96J94 861 aaKnown RBP18.4■□□□□ 0.54
COPS7A-202ENST00000455113 BTN2A3PQ96KV6 586 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 SLC2A13Q96QE2 648 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 ZDHHC4Q9NPG8 344 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 COX16Q9P0S2 106 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 PYCARDQ9ULZ3 195 aa18.4■□□□□ 0.54
COPS7A-202ENST00000455113 EIF3CLB5ME19 914 aaKnown RBP18.39■□□□□ 0.53
COPS7A-202ENST00000455113 PRRT4C9JH25 899 aa18.39■□□□□ 0.53
COPS7A-202ENST00000455113 NPC1O15118 1278 aa18.39■□□□□ 0.53
COPS7A-202ENST00000455113 DAB1O75553 588 aa18.39■□□□□ 0.53
COPS7A-202ENST00000455113 HOXB2P14652 356 aa18.39■□□□□ 0.53
COPS7A-202ENST00000455113 HOXD9P28356 352 aaPredicted RBP18.39■□□□□ 0.53
COPS7A-202ENST00000455113 CCR1P32246 355 aa18.39■□□□□ 0.53
COPS7A-202ENST00000455113 RNASE9P60153 205 aaKnown RBP18.39■□□□□ 0.53
COPS7A-202ENST00000455113 EIF4HQ15056 248 aaKnown RBP18.39■□□□□ 0.53
COPS7A-202ENST00000455113 LPAL2Q16609 132 aa18.39■□□□□ 0.53
COPS7A-202ENST00000455113 PIK3R6Q5UE93 754 aa18.39■□□□□ 0.53
COPS7A-202ENST00000455113 LAIR1Q6GTX8 287 aa18.39■□□□□ 0.53
COPS7A-202ENST00000455113 RFWD3Q6PCD5 774 aa18.39■□□□□ 0.53
COPS7A-202ENST00000455113 TRIM72Q6ZMU5 477 aa18.39■□□□□ 0.53
COPS7A-202ENST00000455113 SND1Q7KZF4 910 aaKnown RBP eCLIP18.39■□□□□ 0.53
COPS7A-202ENST00000455113 HJURPQ8NCD3 748 aaPredicted RBP18.39■□□□□ 0.53
COPS7A-202ENST00000455113 CPA5Q8WXQ8 436 aa18.39■□□□□ 0.53
COPS7A-202ENST00000455113 SLC39A13Q96H72 371 aa18.39■□□□□ 0.53
COPS7A-202ENST00000455113 EIF3CQ99613 913 aaKnown RBP18.39■□□□□ 0.53
COPS7A-202ENST00000455113 DESI2Q9BSY9 194 aa18.39■□□□□ 0.53
COPS7A-202ENST00000455113 CIPCQ9C0C6 399 aa18.39■□□□□ 0.53
COPS7A-202ENST00000455113 USP34Q70CQ2 3546 aa18.39■□□□□ 0.53
COPS7A-202ENST00000455113 ZFHX2Q9C0A1 2572 aaPredicted RBP18.39■□□□□ 0.53
COPS7A-202ENST00000455113 ANTXRLA6NF34 631 aa18.38■□□□□ 0.53
COPS7A-202ENST00000455113 TIMM44O43615 452 aa18.38■□□□□ 0.53
COPS7A-202ENST00000455113 TBL1XO60907 577 aa18.38■□□□□ 0.53
COPS7A-202ENST00000455113 LCA5LO95447 670 aa18.38■□□□□ 0.53
COPS7A-202ENST00000455113 GABRB2P47870 512 aa18.38■□□□□ 0.53
COPS7A-202ENST00000455113 NME3Q13232 169 aa18.38■□□□□ 0.53
COPS7A-202ENST00000455113 SRSF5Q13243 272 aaKnown RBP18.38■□□□□ 0.53
COPS7A-202ENST00000455113 ZC3H12AQ5D1E8 599 aaKnown RBP18.38■□□□□ 0.53
COPS7A-202ENST00000455113 NAA35Q5VZE5 725 aa18.38■□□□□ 0.53
COPS7A-202ENST00000455113 EGFLAMQ63HQ2 1017 aa18.38■□□□□ 0.53
COPS7A-202ENST00000455113 TMEM92Q6UXU6 159 aa18.38■□□□□ 0.53
COPS7A-202ENST00000455113 GPR161Q8N6U8 529 aaKnown RBP18.38■□□□□ 0.53
COPS7A-202ENST00000455113 TMEM51Q9NW97 253 aa18.38■□□□□ 0.53
COPS7A-202ENST00000455113 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.38■□□□□ 0.53
COPS7A-202ENST00000455113 PAXBP1Q9Y5B6 917 aa18.38■□□□□ 0.53
COPS7A-202ENST00000455113 DMDP11532 3685 aa18.38■□□□□ 0.53
COPS7A-202ENST00000455113 GOLGA6L7A0A1B0GV03 622 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 TCRBV21S2A2A0A5A6 115 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 GFRA2O00451 464 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 IPO7O95373 1038 aaKnown RBP18.37■□□□□ 0.53
COPS7A-202ENST00000455113 HNRNPLP14866 589 aaKnown RBP eCLIP18.37■□□□□ 0.53
COPS7A-202ENST00000455113 HOXC13P31276 330 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 SCNN1AP37088 669 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 MATKP42679 507 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 NOMO3P69849 1222 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 SPA17Q15506 151 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 GEN1Q17RS7 908 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 FAM133BQ5BKY9 247 aaKnown RBP18.37■□□□□ 0.53
COPS7A-202ENST00000455113 ALKBH5Q6P6C2 394 aaKnown RBP18.37■□□□□ 0.53
COPS7A-202ENST00000455113 C11orf74Q86VG3 221 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 MFN1Q8IWA4 741 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 ACRBPQ8NEB7 543 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 WFIKKN2Q8TEU8 576 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 HMGB4Q8WW32 186 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 TPSD1Q9BZJ3 242 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 STIM2Q9P246 746 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 NENFQ9UMX5 172 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 FAM170AA1A519 330 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 KCNU1A8MYU2 1149 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 M0QYT0 321 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 ADAM23O75077 832 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 IGLV3-25P01717 112 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 CYP1A1P04798 512 aaPredicted RBP18.37■□□□□ 0.53
COPS7A-202ENST00000455113 SLC6A4P31645 630 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 WASP42768 502 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 NSFP46459 744 aaKnown RBP18.37■□□□□ 0.53
COPS7A-202ENST00000455113 BYSLQ13895 437 aaKnown RBP18.37■□□□□ 0.53
COPS7A-202ENST00000455113 STARD3Q14849 445 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 CLEC16AQ2KHT3 1053 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 CCDC122Q5T0U0 273 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 RASSF3Q86WH2 238 aa18.37■□□□□ 0.53
COPS7A-202ENST00000455113 CHSY1Q86X52 802 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms