RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 NOP56O00567 594 aaKnown RBP12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 KLHL41O60662 606 aa12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 ARF4P18085 180 aaPredicted RBP12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 EN1Q05925 392 aaPredicted RBP12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 TMEM132DQ14C87 1099 aa12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 SLC9B1Q4ZJI4 515 aa12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 GJC2Q5T442 439 aaPredicted RBP12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 AAGABQ6PD74 315 aa12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 ACAD11Q709F0 780 aa12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 FBXO16Q8IX29 292 aaPredicted RBP12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 ACTRT2Q8TDY3 377 aa12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 SLC35F5Q8WV83 523 aa12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 FCRL3Q96P31 734 aaPredicted RBP12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 SLC4A5Q9BY07 1137 aa12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 FAM192AQ9GZU8 254 aa12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 COPG2Q9UBF2 871 aa12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 AP4E1Q9UPM8 1137 aa12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 TRIP11Q15643 1979 aa12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 SF3B1O75533 1304 aaKnown RBP eCLIP12.93□□□□□ -0.34
THUMPD3-206ENST00000452837 BPTFQ12830 3046 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 GLRA3O75311 464 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 VTNP04004 478 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 VCLP18206 1134 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 DLG2Q15700 870 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 DPYSL2Q16555 572 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 CELF3Q5SZQ8 465 aaKnown RBP12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 HEATR6Q6AI08 1181 aaKnown RBP12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 ADGRG6Q86SQ4 1221 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 C7orf31Q8N865 590 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 ZNF781Q8N8C0 355 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 COLGALT1Q8NBJ5 622 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 PPP1R36Q96LQ0 422 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 SPATA33Q96N06 139 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 ZDHHC7Q9NXF8 308 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 DPP3Q9NY33 737 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 CPSF2Q9P2I0 782 aaKnown RBP12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 ITGA11Q9UKX5 1188 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 PTPRFP10586 1907 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 MFSD11O43934 449 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 OPHN1O60890 802 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 KLHL2O95198 593 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 UQCRBP14927 111 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 ATICP31939 592 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 SERPINB6P35237 376 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 MSX2P35548 267 aaPredicted RBP12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 CCR10P46092 362 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 ABCE1P61221 599 aaKnown RBP12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 PITX1P78337 314 aaPredicted RBP12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 IRF9Q00978 393 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 TRIP10Q15642 601 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 TMEM110Q86TL2 294 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 SATL1Q86VE3 508 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 ACVR1CQ8NER5 493 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 HTR3CQ8WXA8 447 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 GORASP1Q9BQQ3 440 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 C11orf84Q9BUA3 381 aaPredicted RBP12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 COG4Q9H9E3 785 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 CAB39LQ9H9S4 337 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 PDGFCQ9NRA1 345 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 MAGED2Q9UNF1 606 aaPredicted RBP12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 SORCS3Q9UPU3 1222 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 HES2Q9Y543 173 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 EVPLQ92817 2033 aa12.92□□□□□ -0.34
THUMPD3-206ENST00000452837 NFKBIEO00221 500 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 USP12O75317 370 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 RALBP11234 206 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 PSMB4P28070 264 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 TBL3Q12788 808 aaKnown RBP12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 PPM1LQ5SGD2 360 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 OR52B2Q96RD2 323 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 TBCBQ99426 244 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 KLHL4Q9C0H6 718 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 DNAJC28Q9NX36 388 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 SNX9Q9Y5X1 595 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 USP3Q9Y6I4 520 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 KLHL33A6NCF5 533 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 CAPN8A6NHC0 703 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 DGKIO75912 1065 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 C22orf31O95567 290 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 LCP1P13796 627 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 FAM131BQ86XD5 332 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 GCNAQ96QF7 691 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 AGAP2Q99490 1192 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 SEPT10Q9P0V9 454 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 G3BP2Q9UN86 482 aaKnown RBP12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 A0A0A0MRY4 1105 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 GOLGA8QA0A0J9YX86 632 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 GOLGA8OA6NCC3 632 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 GOLGA8NF8WBI6 632 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 TXNDC9O14530 226 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 ATP5BP06576 529 aaKnown RBP12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 TGFB3P10600 412 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 COX4I1P13073 169 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 CCDC130P13994 396 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 ALOX15P16050 662 aaPredicted RBP12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 TYK2P29597 1187 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 HARS2P49590 506 aaKnown RBP12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 RPS6KA3P51812 740 aa12.91□□□□□ -0.34
THUMPD3-206ENST00000452837 MED21Q13503 144 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms