RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 LAIR1Q6GTX8 287 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 RFWD3Q6PCD5 774 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 LONP2Q86WA8 852 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 DRC7Q8IY82 874 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 EMC1Q8N766 993 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 JOSD2Q8TAC2 188 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 RXFP2Q8WXD0 754 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 SELENOOQ9BVL4 669 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 PIGVQ9NUD9 493 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 POLR3BQ9NW08 1133 aaPredicted RBP20.67■□□□□ 0.9
COL9A3-202ENST00000452372 XPO7Q9UIA9 1087 aaKnown RBP20.67■□□□□ 0.9
COL9A3-202ENST00000452372 EML5Q05BV3 1969 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 C2CD4BA6NLJ0 364 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 RTN2O75298 545 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 ENDOD1O94919 500 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 GJB6O95452 261 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 FTLP02792 175 aaPredicted RBP20.66■□□□□ 0.9
COL9A3-202ENST00000452372 PDGFRAP16234 1089 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 HOXD9P28356 352 aaPredicted RBP20.66■□□□□ 0.9
COL9A3-202ENST00000452372 RFC1P35251 1148 aaPredicted RBP20.66■□□□□ 0.9
COL9A3-202ENST00000452372 MRPS21P82921 87 aaKnown RBP20.66■□□□□ 0.9
COL9A3-202ENST00000452372 DEUP1Q05D60 604 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 ARID5BQ14865 1188 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 MS4A13Q5J8X5 152 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 BRMS1LQ5PSV4 323 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 SND1Q7KZF4 910 aaKnown RBP eCLIP20.66■□□□□ 0.99e-18■■■□□ 15.1
COL9A3-202ENST00000452372 DGLUCYQ7Z3D6 616 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 VPS36Q86VN1 386 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 SFTPA1Q8IWL2 248 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 OR8K1Q8NGG5 319 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 USP33Q8TEY7 942 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 CFAP57Q96MR6 1250 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 WDCPQ9H6R7 721 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 ADAMTS1Q9UHI8 967 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 SLC27A6Q9Y2P4 619 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 PAXBP1Q9Y5B6 917 aa20.66■□□□□ 0.9
COL9A3-202ENST00000452372 PLEKP08567 350 aaPredicted RBP20.65■□□□□ 0.9
COL9A3-202ENST00000452372 TPM1P09493 284 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 TACR2P21452 398 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 RRM1P23921 792 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 SDC4P31431 198 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 CNR2P34972 360 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 PTPN9P43378 593 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 SIM2Q14190 667 aaPredicted RBP20.65■□□□□ 0.9
COL9A3-202ENST00000452372 CCDC14Q49A88 953 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 PPP1R15BQ5SWA1 713 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 RNF43Q68DV7 783 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 DNAJC24Q6P3W2 148 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 WDR59Q6PJI9 974 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 WDR5BQ86VZ2 330 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 RPLP0P6Q8NHW5 317 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 DNAJC7Q99615 494 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 ISCUQ9H1K1 167 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 ARHGEF38Q9NXL2 777 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 ARHGAP20Q9P2F6 1191 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 CLEC4EQ9ULY5 219 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 STARD13Q9Y3M8 1113 aa20.65■□□□□ 0.9
COL9A3-202ENST00000452372 TBL1XO60907 577 aa20.64■□□□□ 0.89
COL9A3-202ENST00000452372 RETP07949 1114 aa20.64■□□□□ 0.89
COL9A3-202ENST00000452372 CHRM1P11229 460 aaPredicted RBP20.64■□□□□ 0.89
COL9A3-202ENST00000452372 KIR2DL1P43626 348 aaPredicted RBP20.64■□□□□ 0.89
COL9A3-202ENST00000452372 SGSHP51688 502 aa20.64■□□□□ 0.89
COL9A3-202ENST00000452372 ATXN1P54253 815 aaKnown RBP20.64■□□□□ 0.89
COL9A3-202ENST00000452372 SEC13P55735 322 aa20.64■□□□□ 0.89
COL9A3-202ENST00000452372 SPEM2Q0P670 501 aa20.64■□□□□ 0.89
COL9A3-202ENST00000452372 TBX2Q13207 712 aaPredicted RBP20.64■□□□□ 0.89
COL9A3-202ENST00000452372 C2orf27AQ580R0 203 aa20.64■□□□□ 0.89
COL9A3-202ENST00000452372 C10orf76Q5T2E6 689 aa20.64■□□□□ 0.89
COL9A3-202ENST00000452372 RAP1GAP2Q684P5 730 aa20.64■□□□□ 0.89
COL9A3-202ENST00000452372 PRR23BQ6ZRT6 265 aa20.64■□□□□ 0.89
COL9A3-202ENST00000452372 HJURPQ8NCD3 748 aaPredicted RBP20.64■□□□□ 0.89
COL9A3-202ENST00000452372 KCNV2Q8TDN2 545 aa20.64■□□□□ 0.89
COL9A3-202ENST00000452372 PRMT1Q99873 361 aaKnown RBP20.64■□□□□ 0.89
COL9A3-202ENST00000452372 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.64■□□□□ 0.89
COL9A3-202ENST00000452372 TKTL2Q9H0I9 626 aa20.64■□□□□ 0.89
COL9A3-202ENST00000452372 GMEB2Q9UKD1 530 aa20.64■□□□□ 0.89
COL9A3-202ENST00000452372 CNOT1A5YKK6 2376 aaKnown RBP20.63■□□□□ 0.89
COL9A3-202ENST00000452372 ANKRD62A6NC57 917 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 ANTXRLA6NF34 631 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 PRRT4C9JH25 899 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 PAGE1O75459 146 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 ADCY5O95622 1261 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 RDXP35241 583 aaKnown RBP20.63■□□□□ 0.89
COL9A3-202ENST00000452372 PXNP49023 591 aaPredicted RBP20.63■□□□□ 0.89
COL9A3-202ENST00000452372 ATP11AP98196 1134 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 TSR1Q2NL82 804 aaKnown RBP20.63■□□□□ 0.89
COL9A3-202ENST00000452372 EMC10Q5UCC4 262 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 PLEKHA7Q6IQ23 1121 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 SYT13Q7L8C5 426 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 STRADAQ7RTN6 431 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 CHSY1Q86X52 802 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 DNAAF5Q86Y56 855 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 LGI2Q8N0V4 545 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 CENPIQ92674 756 aaPredicted RBP20.63■□□□□ 0.89
COL9A3-202ENST00000452372 MYEOVQ96EZ4 313 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 PRICKLE1Q96MT3 831 aaPredicted RBP20.63■□□□□ 0.89
COL9A3-202ENST00000452372 PARVAQ9NVD7 372 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 RAB23Q9ULC3 237 aa20.63■□□□□ 0.89
COL9A3-202ENST00000452372 TPRP12270 2363 aaKnown RBP20.63■□□□□ 0.89
COL9A3-202ENST00000452372 A0A087X0T9 212 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms