RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 DNAJC10Q8IXB1 793 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 ZNF786Q8N393 782 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 MYCT1Q8N699 235 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 NAT8LQ8N9F0 302 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 LSM14AQ8ND56 463 aaKnown RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 SUN5Q8TC36 379 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 MED30Q96HR3 178 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 KLHL32Q96NJ5 620 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 SLC4A9Q96Q91 983 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 NAA50Q9GZZ1 169 aaKnown RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 FAM96AQ9H5X1 160 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 DNAJC28Q9NX36 388 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 MKS1Q9NXB0 559 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 ZBTB21Q9ULJ3 1066 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 ZNF839A8K0R7 811 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 PI4K2BG5E9Z4 385 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 PLOD2O00469 737 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 AIM2O14862 343 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 TEX28O15482 410 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 TIMM44O43615 452 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 GRIN3BO60391 1043 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 ZC3H11AO75152 810 aaKnown RBP eCLIP8.84□□□□□ -0.99
LSM5-208ENST00000450169 FAM155BO75949 473 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 CLPXO76031 633 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 FAM13AO94988 1023 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 RECKO95980 971 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 SPATA31C1P0DKV0 1188 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 UBL4AP11441 157 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 CCNA2P20248 432 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 MAP4P27816 1152 aaKnown RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 ADSLP30566 484 aaPredicted RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 GCLMP48507 274 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 ATXN3P54252 364 aaPredicted RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 ATP6V0D1P61421 351 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 PRAMEP78395 509 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 PPP3CAQ08209 521 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 NME3Q13232 169 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 PARP10Q53GL7 1025 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 PIGGQ5H8A4 983 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 FSCBQ5H9T9 825 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 SLC27A3Q5K4L6 730 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 PPM1LQ5SGD2 360 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 PERM1Q5SV97 790 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 ANGEL2Q5VTE6 544 aaKnown RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 TTC33Q6PID6 262 aaPredicted RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 ZC3H7AQ8IWR0 971 aaKnown RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 MCOLN2Q8IZK6 566 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 Q8N9G6 341 aaPredicted RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 SLC44A5Q8NCS7 719 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 TNIP2Q8NFZ5 429 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 SHC3Q92529 594 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 SPATA17Q96L03 361 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 KREMEN1Q96MU8 473 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 CDRT15Q96T59 188 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 MMP19Q99542 508 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 RTFDC1Q9BY42 306 aaPredicted RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 RNF38Q9H0F5 515 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 SEMA6AQ9H2E6 1030 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 DHX33Q9H6R0 707 aaKnown RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 RIOX1Q9H6W3 641 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 MARCH7Q9H992 704 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 MOV10Q9HCE1 1003 aaKnown RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 TMEM9Q9P0T7 183 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 CRNNQ9UBG3 495 aaPredicted RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 FBXO9Q9UK97 447 aaPredicted RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 SATB2Q9UPW6 733 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 PCDHGA11Q9Y5H2 935 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 PSME4Q14997 1843 aa8.83□□□□□ -1
LSM5-208ENST00000450169 CENPBD1B2RD01 187 aa8.83□□□□□ -1
LSM5-208ENST00000450169 KBTBD13C9JR72 458 aa8.83□□□□□ -1
LSM5-208ENST00000450169 HTRA2O43464 458 aaPredicted RBP8.83□□□□□ -1
LSM5-208ENST00000450169 ENTPD3O75355 529 aa8.83□□□□□ -1
LSM5-208ENST00000450169 BCL10O95999 233 aa8.83□□□□□ -1
LSM5-208ENST00000450169 POLR2BP30876 1174 aaKnown RBP8.83□□□□□ -1
LSM5-208ENST00000450169 IDUAP35475 653 aa8.83□□□□□ -1
LSM5-208ENST00000450169 HPCAL1P37235 193 aa8.83□□□□□ -1
LSM5-208ENST00000450169 MFAP3P55082 362 aa8.83□□□□□ -1
LSM5-208ENST00000450169 TUBA1BP68363 451 aa8.83□□□□□ -1
LSM5-208ENST00000450169 MS4A2Q01362 244 aa8.83□□□□□ -1
LSM5-208ENST00000450169 DGKDQ16760 1214 aa8.83□□□□□ -1
LSM5-208ENST00000450169 ABCB5Q2M3G0 1257 aa8.83□□□□□ -1
LSM5-208ENST00000450169 Q3C1V9 767 aa8.83□□□□□ -1
LSM5-208ENST00000450169 CAVIN4Q5BKX8 364 aa8.83□□□□□ -1
LSM5-208ENST00000450169 ZFYVE27Q5T4F4 411 aa8.83□□□□□ -1
LSM5-208ENST00000450169 LLGL2Q6P1M3 1020 aa8.83□□□□□ -1
LSM5-208ENST00000450169 TUBA1AQ71U36 451 aa8.83□□□□□ -1
LSM5-208ENST00000450169 HEATR4Q86WZ0 1026 aa8.83□□□□□ -1
LSM5-208ENST00000450169 IGDCC3Q8IVU1 814 aa8.83□□□□□ -1
LSM5-208ENST00000450169 CTAGE3PQ8IX95 158 aa8.83□□□□□ -1
LSM5-208ENST00000450169 SLFN12Q8IYM2 578 aa8.83□□□□□ -1
LSM5-208ENST00000450169 UBR7Q8N806 425 aa8.83□□□□□ -1
LSM5-208ENST00000450169 DDX1Q92499 740 aaKnown RBP8.83□□□□□ -1
LSM5-208ENST00000450169 NKD2Q969F2 451 aaPredicted RBP8.83□□□□□ -1
LSM5-208ENST00000450169 ZNF347Q96SE7 839 aa8.83□□□□□ -1
LSM5-208ENST00000450169 RAB20Q9NX57 234 aa8.83□□□□□ -1
LSM5-208ENST00000450169 DDX56Q9NY93 547 aaKnown RBP8.83□□□□□ -1
LSM5-208ENST00000450169 VPS28Q9UK41 221 aa8.83□□□□□ -1
LSM5-208ENST00000450169 TRAF6Q9Y4K3 522 aa8.83□□□□□ -1
LSM5-208ENST00000450169 PCDHB9Q9Y5E1 797 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms