RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 WDR36Q8NI36 951 aaKnown RBP8.31□□□□□ -1.08
LINC01961-201ENST00000449954 GOLGA1Q92805 767 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 PRR11Q96HE9 360 aaPredicted RBP8.31□□□□□ -1.08
LINC01961-201ENST00000449954 C8orf48Q96LL4 319 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 AIFM3Q96NN9 605 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 FUCA2Q9BTY2 467 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 GZF1Q9H116 711 aaPredicted RBP8.31□□□□□ -1.08
LINC01961-201ENST00000449954 DPP3Q9NY33 737 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 LSM7Q9UK45 103 aaKnown RBP8.31□□□□□ -1.08
LINC01961-201ENST00000449954 CPSF3Q9UKF6 684 aaKnown RBP8.31□□□□□ -1.08
LINC01961-201ENST00000449954 ACSL6Q9UKU0 697 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 PLAAQ9Y263 795 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 PCDHGA7Q9Y5G6 932 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 A0A1W2PNU3 283 aaPredicted RBP8.3□□□□□ -1.08
LINC01961-201ENST00000449954 TRIM38O00635 465 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 GABRDO14764 452 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 HNRNPDLO14979 420 aaKnown RBP8.3□□□□□ -1.08
LINC01961-201ENST00000449954 TNFSF15O95150 251 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 OR52Z1P0C646 297 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 THEGLP0DJG4 465 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 ALPPL2P10696 532 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 IRF1P10914 325 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 SCP2P22307 547 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 BDNFP23560 247 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 HARS2P49590 506 aaKnown RBP8.3□□□□□ -1.08
LINC01961-201ENST00000449954 MFAP3P55082 362 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 EVCP57679 992 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 ARID5AQ03989 594 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 SFSWAPQ12872 951 aaKnown RBP8.3□□□□□ -1.08
LINC01961-201ENST00000449954 OVGP1Q12889 678 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 MAPK7Q13164 816 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 KCNAB2Q13303 367 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 LBRQ14739 615 aaKnown RBP8.3□□□□□ -1.08
LINC01961-201ENST00000449954 CLCA4Q14CN2 919 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 CCDC142Q17RM4 750 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 EARS2Q5JPH6 523 aaKnown RBP8.3□□□□□ -1.08
LINC01961-201ENST00000449954 SNX30Q5VWJ9 437 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 USP30Q70CQ3 517 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 C14orf80Q86SX3 495 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 IQCHQ86VS3 1027 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 NT5DC4Q86YG4 428 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 ADGRF2Q8IZF7 708 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 MAPK15Q8TD08 544 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 KCNN1Q92952 543 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 MYLPFQ96A32 169 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 ATXN7L3BQ96GX2 97 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 NACA2Q9H009 215 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 BRMS1Q9HCU9 246 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 ELOVL2Q9NXB9 296 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 SEPT10Q9P0V9 454 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 SCML1Q9UN30 329 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 NCKAP1Q9Y2A7 1128 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 ENTPD2Q9Y5L3 495 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 SNX14Q9Y5W7 946 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 MTORP42345 2549 aa8.3□□□□□ -1.08
LINC01961-201ENST00000449954 A0A0B4J269 797 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 LRRC72A6NJI9 287 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 F8VP50 259 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 TIMM44O43615 452 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 TCEA3O75764 348 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 RTN3O95197 1032 aaPredicted RBP8.29□□□□□ -1.08
LINC01961-201ENST00000449954 PIGRP01833 764 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 LIPCP11150 499 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 PLS3P13797 630 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 GRNP28799 593 aaKnown RBP8.29□□□□□ -1.08
LINC01961-201ENST00000449954 CCR5P51681 352 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 POU5F1Q01860 360 aaKnown RBP8.29□□□□□ -1.08
LINC01961-201ENST00000449954 GEN1Q17RS7 908 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 ARSJQ5FYB0 599 aaPredicted RBP8.29□□□□□ -1.08
LINC01961-201ENST00000449954 BORAQ6PGQ7 559 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 BLOC1S2Q6QNY1 142 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 RBM44Q6ZP01 1051 aaKnown RBP8.29□□□□□ -1.08
LINC01961-201ENST00000449954 MAMDC2Q7Z304 686 aaPredicted RBP8.29□□□□□ -1.08
LINC01961-201ENST00000449954 ZC3H18Q86VM9 953 aaKnown RBP8.29□□□□□ -1.08
LINC01961-201ENST00000449954 TOP6BLQ8N6T0 577 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 LRRC52Q8N7C0 313 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 TPCN2Q8NHX9 752 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 FBXO32Q969P5 355 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 SERAC1Q96JX3 654 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 SYT15Q9BQS2 421 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 MSTO1Q9BUK6 570 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 GDAP2Q9NXN4 497 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 DKK3Q9UBP4 350 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 CDH9Q9ULB4 789 aa8.29□□□□□ -1.08
LINC01961-201ENST00000449954 RP1L1Q8IWN7 2480 aaPredicted RBP8.28□□□□□ -1.08
LINC01961-201ENST00000449954 COL27A1Q8IZC6 1860 aaPredicted RBP8.28□□□□□ -1.08
LINC01961-201ENST00000449954 A0A087X0B3 334 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 CCDC187A0A096LP49 1063 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 FAM47DPA6NHR8 397 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 RNF225M0QZC1 329 aaPredicted RBP8.28□□□□□ -1.08
LINC01961-201ENST00000449954 NOBOXO60393 691 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 GREM1O60565 184 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 SDC3O75056 442 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 DDAH2O95865 285 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 PENKP01210 267 aaPredicted RBP8.28□□□□□ -1.08
LINC01961-201ENST00000449954 IGHDP01880 384 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 GUCY2CP25092 1073 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 YWHAQP27348 245 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 KRT2P35908 639 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 CCT6AP40227 531 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms